RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ZNFX1Q9P2E3 1918 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 IGLV3-22A0A075B6J6 115 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 FAM237AA0A1B0GTK4 181 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 GOLGA6L4A6NEF3 574 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ELOA3DA6NLF2 546 aaPredicted RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 XYLBO75191 536 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 EPB42P16452 691 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 LIG1P18858 919 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 EIF2AK2P19525 551 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 CMA1P23946 247 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 MPSTP25325 297 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 INHBEP58166 350 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 UBXN2AP68543 259 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 CCNA1P78396 465 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 NOGQ13253 232 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 TAF1CQ15572 869 aaPredicted RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 IL17AQ16552 155 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 SKOR2Q2VWA4 1001 aaPredicted RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 Q4G0T1 1027 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ARL6IP4Q66PJ3 421 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 ADALQ6DHV7 355 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 SHC4Q6S5L8 630 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 NCAPG2Q86XI2 1143 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ANKRD13CQ8N6S4 541 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 FSIP1Q8NA03 581 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 GPRC5AQ8NFJ5 357 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ETNPPLQ8TBG4 499 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 MRPS27Q92552 414 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 CAPNS2Q96L46 248 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 CLIC6Q96NY7 704 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PNMA5Q96PV4 448 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 MTMR9Q96QG7 549 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 TAAR1Q96RJ0 339 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 RMDN3Q96TC7 470 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PDCD2LQ9BRP1 358 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PORCNQ9H237 461 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 MROH8Q9H579 483 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 KCNMB3Q9NPA1 279 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PXMP2Q9NR77 195 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 DDX25Q9UHL0 483 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 DDX49Q9Y6V7 483 aaKnown RBP7.51□□□□□ -1.21
USP48-208ENST00000479177 MCM3APO60318 1980 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 PLXNA1Q9UIW2 1896 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 ASTN1O14525 1302 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 DOCK3Q8IZD9 2030 aa7.51□□□□□ -1.21
USP48-208ENST00000479177 KIAA1217Q5T5P2 1943 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 DNAJC25-GNG10A0A024R161 153 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 VWA3AA6NCI4 1184 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 FAM86B1E9PN63 330 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 AOC2O75106 756 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 ABL1P00519 1130 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 FAM86B2P0C5J1 330 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 PFKFB1P16118 471 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 TM4SF4P48230 202 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 SERPINB4P48594 390 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 PGM5Q15124 567 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 CALCRLQ16602 461 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 CEP55Q53EZ4 464 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 PRR16Q569H4 304 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 ARHGEF16Q5VV41 709 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 XRRA1Q6P2D8 792 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 CCDC73Q6ZRK6 1079 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 NIPA1Q7RTP0 329 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 CCAR1Q8IX12 1150 aaKnown RBP7.5□□□□□ -1.21
USP48-208ENST00000479177 ANKRD35Q8N283 1001 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 FAM133AQ8N9E0 248 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 ENGASEQ8NFI3 743 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 NSUN6Q8TEA1 469 aaKnown RBP7.5□□□□□ -1.21
USP48-208ENST00000479177 HAS1Q92839 578 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 FGD4Q96M96 766 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 MMP19Q99542 508 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 UBE2OQ9C0C9 1292 aaKnown RBP7.5□□□□□ -1.21
USP48-208ENST00000479177 CSRNP2Q9H175 543 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 HPSEQ9Y251 543 aa7.5□□□□□ -1.21
USP48-208ENST00000479177 MGAMO43451 1857 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 MEIS1O00470 390 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 TBX3O15119 743 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 MSH4O15457 936 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 TLR2O60603 784 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 ALBP02768 609 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 RARAP10276 462 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 ITGB5P18084 799 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 EDNRBP24530 442 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 CCND2P30279 289 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 LONP1P36776 959 aaKnown RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 ALDH5A1P51649 535 aaPredicted RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 NDUFA8P51970 172 aa7.49□□□□□ -1.21
USP48-208ENST00000479177 MRPS9P82933 396 aaKnown RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 SETQ01105 290 aaPredicted RBP7.49□□□□□ -1.21
USP48-208ENST00000479177 CNTN2Q02246 1040 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms