RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 CAPN12Q6ZSI9 719 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 RAB11FIP4Q86YS3 637 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 MB21D2Q8IYB1 491 aaPredicted RBP9.21□□□□□ -0.94
CHD6-207ENST00000476641 MSL3Q8N5Y2 521 aaKnown RBP9.21□□□□□ -0.94
CHD6-207ENST00000476641 KLHDC9Q8NEP7 349 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 PPP1R13LQ8WUF5 828 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 MAP4K1Q92918 833 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 TRIM43Q96BQ3 446 aaPredicted RBP9.21□□□□□ -0.94
CHD6-207ENST00000476641 MYL10Q9BUA6 226 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 ABHD16BQ9H3Z7 469 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 JMJD4Q9H9V9 463 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 COL20A1Q9P218 1284 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 PLXNA1Q9UIW2 1896 aa9.21□□□□□ -0.94
CHD6-207ENST00000476641 IFIT3O14879 490 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 DHX16O60231 1041 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 DUSP11O75319 330 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 PARP1P09874 1014 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 ALDH5A1P51649 535 aaPredicted RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 ACLYP53396 1101 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 SNX17Q15036 470 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 GPATCH4Q5T3I0 446 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 RNF207Q6ZRF8 634 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 CENPQQ7L2Z9 268 aaPredicted RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 RNF180Q86T96 592 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 COPS5Q92905 334 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 LRRC2Q9BYS8 371 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 CNNM2Q9H8M5 875 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 OSGEPQ9NPF4 335 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 MAD2L2Q9UI95 211 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 GNEQ9Y223 722 aaKnown RBP9.2□□□□□ -0.94
CHD6-207ENST00000476641 LCTP09848 1927 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
CHD6-207ENST00000476641 ASB14A6NK59 587 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 KLRF2D3W0D1 207 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 SLC27A2O14975 620 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 DYNC1LI2O43237 492 aaPredicted RBP9.19□□□□□ -0.94
CHD6-207ENST00000476641 CYTH3O43739 400 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 ARIH2O95376 493 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 RXRAP19793 462 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 MAP4P27816 1152 aaKnown RBP9.19□□□□□ -0.94
CHD6-207ENST00000476641 GJA9P57773 515 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 TNFAIP2Q03169 654 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 GRM4Q14833 912 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 ASPRV1Q53RT3 343 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 TMEM67Q5HYA8 995 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 CXCL17Q6UXB2 119 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 TLK2Q86UE8 772 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 FBXL6Q8N531 539 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 GIMAP7Q8NHV1 300 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 SYTL5Q8TDW5 730 aaPredicted RBP9.19□□□□□ -0.94
CHD6-207ENST00000476641 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 SLC7A3Q8WY07 619 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 BADQ92934 168 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 TCEANC2Q96MN5 208 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 UPF3AQ9H1J1 476 aaKnown RBP9.19□□□□□ -0.94
CHD6-207ENST00000476641 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 KANSL3Q9P2N6 904 aa9.19□□□□□ -0.94
CHD6-207ENST00000476641 BAZ2BQ9UIF8 2168 aaKnown RBP9.19□□□□□ -0.94
CHD6-207ENST00000476641 GRIN2DO15399 1336 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 ASGR1P07306 291 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 CST5P28325 142 aaPredicted RBP9.18□□□□□ -0.94
CHD6-207ENST00000476641 EPHB4P54760 987 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 PSMC6P62333 389 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 TRDNQ13061 729 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 WTAPQ15007 396 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 SGO2Q562F6 1265 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 CCDC178Q5BJE1 867 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 C9orf50Q5SZB4 431 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 CREB3L3Q68CJ9 461 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 RALYLQ86SE5 291 aaKnown RBP9.18□□□□□ -0.94
CHD6-207ENST00000476641 HOMER1Q86YM7 354 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 NCOA7Q8NI08 942 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 IGDCC4Q8TDY8 1250 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 NUP133Q8WUM0 1156 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 PIGSQ96S52 555 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 STARD7Q9NQZ5 370 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 STIM2Q9P246 746 aa9.18□□□□□ -0.94
CHD6-207ENST00000476641 LRRC37A2A6NM11 1700 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 COL6A3P12111 3177 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 ZBTB39O15060 712 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 PRC1O43663 620 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 EDNRBP24530 442 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
CHD6-207ENST00000476641 BMP8BP34820 402 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 FAAP100Q0VG06 881 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 TROAPQ12815 778 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
CHD6-207ENST00000476641 Q7L0L9 218 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 TDHQ8IZJ6 230 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 MTMR8Q96EF0 704 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
CHD6-207ENST00000476641 WDR11Q9BZH6 1224 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms