RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SF3A2Q15428 464 aaKnown RBP12.24□□□□□ -0.45
TRAIP-202ENST00000469027 MARCH8Q5T0T0 291 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 STPG1Q5TH74 334 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 PDZD3Q86UT5 571 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 RNF169Q8NCN4 708 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 DOCK8Q8NF50 2099 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAIP-202ENST00000469027 TELO2Q9Y4R8 837 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 ITPR1Q14643 2758 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 IGSF10Q6WRI0 2623 aa12.24□□□□□ -0.45
TRAIP-202ENST00000469027 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 MYH6P13533 1939 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 TM4SF5O14894 197 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 MYBP10242 640 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 LAMP2P13473 410 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 HOXA13P31271 388 aaPredicted RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 MTAPQ13126 283 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 ODR4Q5SWX8 454 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 GATA6Q92908 595 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 PIDD1Q9HB75 910 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
TRAIP-202ENST00000469027 SMG1Q96Q15 3661 aaKnown RBP12.23□□□□□ -0.45
TRAIP-202ENST00000469027 LOC400499M0QZD8 3231 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 ADAMTS20P59510 1910 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 CTSAP10619 480 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 HSD17B4P51659 736 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 CLCN4P51793 760 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 CCDC6Q16204 474 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 LURAP1LQ8IV03 231 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 SMG7Q92540 1137 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 LSM14BQ9BX40 385 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 ELAC1Q9H777 363 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 RXFP3Q9NSD7 469 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 ST3GAL5Q9UNP4 418 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 NOC2LQ9Y3T9 749 aaKnown RBP12.22□□□□□ -0.45
TRAIP-202ENST00000469027 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 DMXL2Q8TDJ6 3036 aa12.22□□□□□ -0.45
TRAIP-202ENST00000469027 MYH15Q9Y2K3 1946 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 AKAP13Q12802 2813 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 GIPC1O14908 333 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 GPR182O15218 404 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 INPPL1O15357 1258 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ZC3H11AO75152 810 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 SSBP05455 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 NOVP48745 357 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 POLGP54098 1239 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 BCAR1P56945 870 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ELMSAN1Q6PJG2 1045 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 TPRG1Q6ZUI0 275 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 CEP68Q76N32 757 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ADGRF4Q8IZF3 695 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 PHKBQ93100 1093 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 RPP25Q9BUL9 199 aaKnown RBP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 ECHDC1Q9NTX5 307 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
TRAIP-202ENST00000469027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAIP-202ENST00000469027 KDM3AQ9Y4C1 1321 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 ANHXE9PGG2 379 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 FIBPO43427 364 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 SEC24BO95487 1268 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 INSRRP14616 1297 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 PFKPQ01813 784 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 SRSF5Q13243 272 aaKnown RBP12.2□□□□□ -0.46
TRAIP-202ENST00000469027 WTAPQ15007 396 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 RSPO2Q6UXX9 243 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-202ENST00000469027 CMASQ8NFW8 434 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-202ENST00000469027 TRAPPC12Q8WVT3 735 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 PPP1R16BQ96T49 567 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 NELL2Q99435 816 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 DDX19BQ9UMR2 479 aa12.2□□□□□ -0.46
TRAIP-202ENST00000469027 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
TRAIP-202ENST00000469027 SPATA31C2B4DYI2 1134 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 AXIN1O15169 862 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms