RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PPM1KQ8N3J5 372 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 CNBD1Q8NA66 436 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 NUP43Q8NFH3 380 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 PLEKHO2Q8TD55 490 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 SHISA4Q96DD7 197 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 SCLYQ96I15 445 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 KIRREL1Q96J84 757 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 SPC25Q9HBM1 224 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 PGAP2Q9UHJ9 254 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 GPR160Q9UJ42 338 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.36□□□□□ -1.39
COPS3-204ENST00000462236 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
COPS3-204ENST00000462236 RANBP2P49792 3224 aaKnown RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 A0A1W2PQJ5 194 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 PSPNO60542 156 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 PPP1R11O60927 126 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 DNAJC8O75937 253 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 SOD2P04179 222 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 VIL1P09327 827 aaKnown RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 GRK2P25098 689 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 GRK3P35626 688 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 EPS15P42566 896 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 SLC6A11P48066 632 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 MASP1P48740 699 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 ERVFC1P60507 584 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 ERVFRD-1P60508 538 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 FAM47CQ5HY64 1035 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 CLEC4GQ6UXB4 293 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 USP50Q70EL3 339 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 CEP68Q76N32 757 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 RTKN2Q8IZC4 609 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 ZNF496Q96IT1 587 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 PLCD4Q9BRC7 762 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 ORAI3Q9BRQ5 295 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 BRINP2Q9C0B6 783 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 CLDND1Q9NY35 253 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 GULP1Q9UBP9 304 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 COA3Q9Y2R0 106 aaPredicted RBP6.35□□□□□ -1.39
COPS3-204ENST00000462236 PCDHA9Q9Y5H5 950 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 A0A0C4DFX4 3053 aa6.35□□□□□ -1.39
COPS3-204ENST00000462236 RIC1Q4ADV7 1423 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 LRRC37AA6NMS7 1700 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 DDX60Q8IY21 1712 aaKnown RBP6.34□□□□□ -1.39
COPS3-204ENST00000462236 C22orf46C9J442 243 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 TRAF5O00463 557 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 DNAJC6O75061 913 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 STARD3NLO95772 234 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 ST5P78524 1137 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 TMEM62Q0P6H9 643 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 CRY2Q49AN0 593 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 TIGD5Q53EQ6 642 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 UBE2R2Q712K3 238 aaPredicted RBP6.34□□□□□ -1.39
COPS3-204ENST00000462236 C16orf59Q7L2K0 433 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 KRT26Q7Z3Y9 468 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 FGD2Q7Z6J4 655 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
COPS3-204ENST00000462236 LRRTM3Q86VH5 581 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 KIF18BQ86Y91 864 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 PCDH19Q8TAB3 1148 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 USP33Q8TEY7 942 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 DDX1Q92499 740 aaKnown RBP6.34□□□□□ -1.39
COPS3-204ENST00000462236 FBXW5Q969U6 566 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 CHAMP1Q96JM3 812 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 TEX13AQ9BXU3 409 aaPredicted RBP6.34□□□□□ -1.39
COPS3-204ENST00000462236 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 TNFRSF12AQ9NP84 129 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 MARCH2Q9P0N8 246 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 NUB1Q9Y5A7 615 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 PCDHA8Q9Y5H6 950 aa6.34□□□□□ -1.39
COPS3-204ENST00000462236 KDM3BQ7LBC6 1761 aa6.34□□□□□ -1.4
COPS3-204ENST00000462236 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.4
COPS3-204ENST00000462236 CEMIPQ8WUJ3 1361 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 ANKRD62A6NC57 917 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 HRKO00198 91 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 OPA1O60313 960 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 DGKIO75912 1065 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 FUCA1P04066 466 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 A1BGP04217 495 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 CYBBP04839 570 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 GLI4P10075 376 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 ITGB5P18084 799 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 SDSP20132 328 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 NR1I3Q14994 352 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 MTHFSDQ2M296 383 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 ZNF790Q6PG37 636 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 PAQR3Q6TCH7 311 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 DCP2Q8IU60 420 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 IRF2BP1Q8IU81 584 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms