RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 GTPBP10A4D1E9 387 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 METTL12A8MUP2 240 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 AREL1O15033 823 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA12O60330 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 MYBP10242 640 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 GLB1P16278 677 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 HOXC13P31276 330 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 CTNNA1P35221 906 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 HOXD12P35452 270 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PPM1AP35813 382 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 KRT20P35900 424 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 GRIA2P42262 883 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 LSSP48449 732 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 CABP4P57796 275 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 SESN3P58005 492 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 OCRLQ01968 901 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 DSG1Q02413 1049 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ZNF252P-AS1Q0IIN9 211 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 SEMA5AQ13591 1074 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 LLGL1Q15334 1064 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 DUOXA2Q1HG44 320 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 KIAA0753Q2KHM9 967 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ARTNQ5T4W7 220 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ITPRIPL1Q6GPH6 555 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 SPOCD1Q6ZMY3 1216 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PDZD4Q76G19 769 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ARHGEF25Q86VW2 580 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PTRH1Q86Y79 214 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 LRRN4CLQ8ND94 238 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 BSNDQ8WZ55 320 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PTPRN2Q92932 1015 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 USP13Q92995 863 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ATP6V1E2Q96A05 226 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 HVCN1Q96D96 273 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 FAM46AQ96IP4 442 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 RIPOR3Q96MK2 946 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 LSM14BQ9BX40 385 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 API5Q9BZZ5 524 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 VPS11Q9H270 941 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 SMOC1Q9H4F8 434 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 TOPORSQ9NS56 1045 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ANKEF1Q9NU02 776 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 C14orf119Q9NWQ9 140 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 NKIRAS2Q9NYR9 191 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 RTEL1Q9NZ71 1219 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 TSPYL4Q9UJ04 414 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 DDX19BQ9UMR2 479 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 SYNPO2Q9UMS6 1093 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 TMEM98Q9Y2Y6 226 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA9Q9Y5G4 932 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA7Q9Y5G6 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA6Q9Y5G7 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA3Q9Y5H0 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 PCDHGA2Q9Y5H1 932 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 MED1Q15648 1581 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 CPDO75976 1380 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 KDRP35968 1356 aa5.54□□□□□ -1.52
SPARCL1-204ENST00000458304 ALS2Q96Q42 1657 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 FANCIQ9NVI1 1328 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CACNA1FO60840 1977 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 STRCP1A6NGW2 1772 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 DLG5Q8TDM6 1919 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 FAM177BA6PVY3 158 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 SMTNL1A8MU46 457 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 GOLGA6L6A8MZA4 724 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 FAM227AF5H4B4 570 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 EYA2O00167 538 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CBX4O00257 560 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 SOX1O00570 391 aaPredicted RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 GAS7O60861 476 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 TIPRLO75663 272 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 PSMA3P25788 255 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 SMARCA1P28370 1054 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 ELF1P32519 619 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 KRT9P35527 623 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CAP2P40123 477 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 ZNF157P51786 506 aaPredicted RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 PTPN11Q06124 597 aaPredicted RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 AP3B2Q13367 1082 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CCNG2Q16589 344 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CCDC38Q502W7 563 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CCDC30Q5VVM6 783 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 CDCP2Q5VXM1 449 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 DARS2Q6PI48 645 aaKnown RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 TOM1L2Q6ZVM7 507 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 DDX53Q86TM3 631 aaKnown RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 SULF2Q8IWU5 870 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 COLGALT2Q8IYK4 626 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 C7orf61Q8IZ16 206 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 NXPE1Q8N323 547 aa5.53□□□□□ -1.52
SPARCL1-204ENST00000458304 KCT2Q8NC54 265 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms