RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 SAMD11Q96NU1 681 aa13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 EIF2AK1Q9BQI3 630 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-211ENST00000451964 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 TTC3P53804 2025 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 A0A087WWV3 80 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 A0A087WZ62 844 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 GPM6BQ13491 265 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 ODR4Q5SWX8 454 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 NOSTRINQ8IVI9 506 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 FDXACB1Q9BRP7 624 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
CSNK1E-211ENST00000451964 POTEMA6NI47 508 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 C5orf67F2Z3F1 127 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 LYPLA2O95372 231 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 CTNNB1P35222 781 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 DNM2P50570 870 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 TOB1P50616 345 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 TFF2Q03403 129 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 NBR1Q14596 966 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 SKIV2LQ15477 1246 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 C4orf32Q8N8J7 132 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 LRFN2Q9ULH4 789 aa13.81□□□□□ -0.2
CSNK1E-211ENST00000451964 GRM6O15303 877 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 RB1P06400 928 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 FGFR1P11362 822 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 XKR9Q5GH70 373 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 OTUD6AQ7L8S5 288 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 PRPF31Q8WWY3 499 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 SLC7A3Q8WY07 619 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 MRPL38Q96DV4 380 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 ASB2Q96Q27 587 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 JPH2Q9BR39 696 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 IFT122Q9HBG6 1241 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 XPNPEP1Q9NQW7 623 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 RNF19AQ9NV58 838 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 EVPLQ92817 2033 aa13.8□□□□□ -0.2
CSNK1E-211ENST00000451964 ZSCAN20P17040 1043 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 RFC5P40937 340 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 TECP42680 631 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 MRPS5P82675 430 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 EMC2Q15006 297 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 PIGOQ8TEQ8 1089 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 NLRP4Q96MN2 994 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
CSNK1E-211ENST00000451964 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 MED24O75448 989 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 GJB2P29033 226 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 LAMTOR4Q0VGL1 99 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 CAMK1Q14012 370 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 PTPROQ16827 1216 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 ECHDC2Q86YB7 292 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 NEK9Q8TD19 979 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 C11orf84Q9BUA3 381 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 PLVAPQ9BX97 442 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 ALG13Q9NP73 1137 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms