RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 ITGA6P23229 1130 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-211ENST00000449833 PUDPQ08623 228 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 IKBKBO14920 756 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 VAMP4O75379 141 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 FAM200BP0CF97 657 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
SHANK2-211ENST00000449833 ATXN3P54252 364 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-211ENST00000449833 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-211ENST00000449833 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 SENP1Q9P0U3 644 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 COPEO14579 308 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 PGM3O95394 542 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 MYL1P05976 194 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 ARL4AP40617 200 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
SHANK2-211ENST00000449833 CCT7Q99832 543 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 CYTH3O43739 400 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 BNC1Q01954 994 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
SHANK2-211ENST00000449833 SMAPO00193 183 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 MEIS1O00470 390 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 TRIM24O15164 1050 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 CLK1P49759 484 aaKnown RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 MTA3Q9BTC8 594 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 ADA2Q9NZK5 511 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 PYCARDQ9ULZ3 195 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 LSM1O15116 133 aaKnown RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 SOX5P35711 763 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 PSMC2P35998 433 aaKnown RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 WDR60Q8WVS4 1066 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 IDH3BO43837 385 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 NUP160Q12769 1436 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 GNAT1P11488 350 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 SCG3Q8WXD2 468 aaKnown RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 FLT4P35916 1363 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 A0A0B4J269 797 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 PNMA8CA0A1B0GUJ8 204 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 FBXW4P57775 412 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 TUBB3Q13509 450 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 VPS39Q96JC1 886 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 ZBTB39O15060 712 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 PJA2O43164 708 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 TAGAPQ8N103 731 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-211ENST00000449833 SLC5A4Q9NY91 659 aa12.36□□□□□ -0.43
SHANK2-211ENST00000449833 CCDC188H7C350 402 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 MAP3K13O43283 966 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 MOCS3O95396 460 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 COPS2P61201 443 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SZRD1Q7Z422 152 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 AK8Q96MA6 479 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 UBA2Q9UBT2 640 aaPredicted RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 EYA2O00167 538 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 TRPM2O94759 1503 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 CCDC142Q17RM4 750 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 BTBD6Q96KE9 485 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 KRT84Q9NSB2 600 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 VIL1P09327 827 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 OTUD7BQ6GQQ9 843 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ZNF654Q8IZM8 581 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ZFATQ9P243 1243 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 LCMT1Q9UIC8 334 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ADCY9O60503 1353 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ANP32DO95626 131 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 NR2F2P24468 414 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 PSMA3P25788 255 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 TGS1Q96RS0 853 aaKnown RBP12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ADNPQ9H2P0 1102 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 ITM2BQ9Y287 266 aa12.35□□□□□ -0.43
SHANK2-211ENST00000449833 SNPHO15079 494 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms