RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 YEATS4O95619 227 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 NASPP49321 788 aaPredicted RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 NFX1Q12986 1120 aaKnown RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 DRP2Q13474 957 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 ECM1Q16610 540 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 RASIP1Q5U651 963 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 KCTD17Q8N5Z5 321 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 MCPH1Q8NEM0 835 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 MMTAG2Q9BU76 263 aaKnown RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 GCOM2Q9BZD3 368 aaPredicted RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 MTMR10Q9NXD2 777 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 SRPRBQ9Y5M8 271 aaKnown RBP15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 SCN5AQ14524 2016 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 GPR182O15218 404 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 SPTLC2O15270 562 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 ASAP2O43150 1006 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 EYA4O95677 639 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 CD52P31358 61 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 TXLNAP40222 546 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 GPC3P51654 580 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 MXD4Q14582 209 aaPredicted RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 ZNF410Q86VK4 478 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 LINC00301Q8NCQ3 95 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 PRPF31Q8WWY3 499 aaKnown RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 ZNF668Q96K58 619 aaPredicted RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 SLC9A7Q96T83 725 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 PLIN2Q99541 437 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 OSBPL7Q9BZF2 842 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 INO80BQ9C086 356 aaPredicted RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 CSRNP2Q9H175 543 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 BHMT2Q9H2M3 363 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 ADAMTS10Q9H324 1103 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 CDHR5Q9HBB8 845 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 FBXO2Q9UK22 296 aaPredicted RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 PADI3Q9ULW8 664 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 MORC2Q9Y6X9 1032 aaPredicted RBP15.59■□□□□ 0.09
GTF3C3-206ENST00000448539 A0A087WZ62 844 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 E9PMD0 336 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 AMHP03971 560 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 WDR5P61964 334 aaKnown RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 NUCB2P80303 420 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 GRIN1Q05586 938 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 TFDP1Q14186 410 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 HYIQ5T013 277 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 FAM102BQ5T8I3 360 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 FAM43BQ6ZT52 329 aaPredicted RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 MAEAQ7L5Y9 396 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 PHOSPHO2Q8TCD6 241 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 FDXACB1Q9BRP7 624 aaPredicted RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 FTHL17Q9BXU8 183 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 AGO3Q9H9G7 860 aaKnown RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 CCDC39Q9UFE4 941 aa15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
GTF3C3-206ENST00000448539 EVPLQ92817 2033 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 PPP6R2O75170 966 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 SSBP05455 408 aaKnown RBP eCLIP15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 SRGAP2CP0DJJ0 459 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 DARSP14868 501 aaKnown RBP15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 CYP11B2P19099 503 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 SMAD3P84022 425 aaKnown RBP15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 DNM1Q05193 864 aaKnown RBP15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 GRB10Q13322 594 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 TCTN1Q2MV58 587 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 SPECC1Q5M775 1068 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 TMEM40Q8WWA1 233 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 CLIC6Q96NY7 704 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 PNMA5Q96PV4 448 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 POLR3FQ9H1D9 316 aaPredicted RBP15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 XPNPEP1Q9NQW7 623 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 ST3GAL5Q9UNP4 418 aa15.57■□□□□ 0.08
GTF3C3-206ENST00000448539 SFPQP23246 707 aaKnown RBP eCLIP15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 KRT85P78386 507 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 KARSQ15046 597 aaKnown RBP15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 RAB30Q15771 203 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 TMEM119Q4V9L6 283 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 FAM228AQ86W67 206 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 SLC17A8Q8NDX2 589 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 SYMPKQ92797 1274 aaKnown RBP15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 EPSTI1Q96J88 318 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 ZBED2Q9BTP6 218 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 CCSER1Q9C0I3 900 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 ERVK-5Q9HDB9 667 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 MSRAQ9UJ68 235 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 STXBP5LQ9Y2K9 1186 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 ZDHHC9Q9Y397 364 aa15.56■□□□□ 0.08
GTF3C3-206ENST00000448539 TET1Q8NFU7 2136 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms