RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 LRRN2O75325 713 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 CYTH1Q15438 398 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ATP8A2Q9NTI2 1148 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ENO1P06733 434 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 STAT4Q14765 748 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SNX30Q5VWJ9 437 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 USP49Q70CQ1 688 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 AGAP11Q8TF27 550 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 MYBL1P10243 752 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 AMPD2Q01433 879 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SLC34A1Q06495 639 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 GPS1Q13098 491 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 ZC4H2Q9NQZ6 224 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 MTDHQ86UE4 582 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 THAP11Q96EK4 314 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 DCLRE1BQ9H816 532 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ACTN1P12814 892 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 TRIM16LQ309B1 348 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 CNBD1Q8NA66 436 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SLC26A7Q8TE54 656 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ZNF483Q8TF39 744 aaPredicted RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 MTBPQ96DY7 904 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 MPP4Q96JB8 637 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ADGRL3Q9HAR2 1447 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 BIVM-ERCC5R4GMW8 1640 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 F8VZ95 297 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 RCAN1P53805 252 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 FSCBQ5H9T9 825 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 TATDN2Q93075 761 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SLC52A2Q9HAB3 445 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 SYNMO15061 1565 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 CENPTQ96BT3 561 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 NMD3Q96D46 503 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 SAMD9Q5K651 1589 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 KRT10P13645 584 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 PDE1BQ01064 536 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 GJA10Q969M2 543 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 STK33Q9BYT3 514 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ABCF3Q9NUQ8 709 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 INTS13Q9NVM9 706 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 COPEO14579 308 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 PPIDQ08752 370 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 KCNMA1Q12791 1236 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 USP38Q8NB14 1042 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 WNT8AQ9H1J5 351 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 DENND2AQ9ULE3 1009 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 H7C0C1 242 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ATP5OP48047 213 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 EIF2B2P49770 351 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 PEX5P50542 639 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 TTC4O95801 387 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TRIP10Q15642 601 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 DNAL1Q4LDG9 190 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 MAEAQ7L5Y9 396 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 PDIK1LQ8N165 341 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 FNBP1Q96RU3 617 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 MAD1L1Q9Y6D9 718 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 CD44P16070 742 aaKnown RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 TCIRG1Q13488 830 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 DPH6Q7L8W6 267 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 PLA2R1Q13018 1463 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 PVALEFA0A1B0GWK0 134 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 STAM2O75886 525 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 ACTRT1Q8TDG2 376 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 JDP2Q8WYK2 163 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 RHOT2Q8IXI1 618 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 BLMHQ13867 455 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TAF1BQ53T94 588 aaPredicted RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 HPSEQ9Y251 543 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 USP17L21D6R901 530 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 RIPK1Q13546 671 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TPCN2Q8NHX9 752 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TTC17Q96AE7 1141 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 HAO1Q9UJM8 370 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 E2F6O75461 281 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 GAP43P17677 238 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 PIK3CAP42336 1068 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 AIPL1Q9NZN9 384 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TMCO1Q9UM00 188 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 ADCY3O60266 1144 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 SERPINB8P50452 374 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 TRMT5Q32P41 509 aaKnown RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 FAM186BQ8IYM0 893 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 CCDC124Q96CT7 223 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms