RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PMLP29590 882 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 RANBP1P43487 201 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 RNF169Q8NCN4 708 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 OR9Q1Q8NGQ5 310 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 MTBPQ96DY7 904 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 CCT8L2Q96SF2 557 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 ABL1P00519 1130 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 SERPINB10P48595 397 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 EPHB1P54762 984 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 MRPS25P82663 173 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 PROSER3Q2NL68 480 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 SYDE2Q5VT97 1194 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 STX18Q9P2W9 335 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
RNF43-201ENST00000407977 E9PMD0 336 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 PSAPP07602 524 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 KCNB1Q14721 858 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 DNAL1Q4LDG9 190 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 PPP1R18Q6NYC8 613 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 KIRREL3Q8IZU9 778 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 TMCO5AQ8N6Q1 288 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 MRGBPQ9NV56 204 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 TEKT2Q9UIF3 430 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 DCTN4Q9UJW0 460 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 KDM5CP41229 1560 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 ERVK-7P63135 1459 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 KRT7P08729 469 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 ENOSF1Q7L5Y1 443 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 STAG2Q8N3U4 1231 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 RAD54LQ92698 747 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 COA7Q96BR5 231 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 THOC1Q96FV9 657 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 DDX56Q9NY93 547 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 YEATS2Q9ULM3 1422 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 H3BRJ5 948 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 CCND2P30279 289 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 EFTUD2Q15029 972 aaKnown RBP eCLIP13.82□□□□□ -0.26e-8■■■■□ 23.1
RNF43-201ENST00000407977 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 ESYT3A0FGR9 886 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 ATP1A1P05023 1023 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 GUCY1A3Q02108 690 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 HIC1Q14526 733 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 TMEM259Q4ZIN3 620 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 CCDC137Q6PK04 289 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 WDR24Q96S15 920 aa13.82□□□□□ -0.2
RNF43-201ENST00000407977 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
RNF43-201ENST00000407977 PRKAB2O43741 272 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
RNF43-201ENST00000407977 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 TSGA10IPQ3SY00 556 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 SGSM3Q96HU1 749 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 SLC13A4Q9UKG4 626 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 PGM1P36871 562 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 MED21Q13503 144 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 CUL3Q13618 768 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 RHOT1Q8IXI2 618 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 ALKBH8Q96BT7 664 aaKnown RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 NBPF3Q9H094 633 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 USP15Q9Y4E8 981 aaPredicted RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 TTC37Q6PGP7 1564 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 TRIM49BA6NDI0 452 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 KCTD1Q719H9 257 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 SLC26A7Q8TE54 656 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 IP6K2Q9UHH9 426 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 PAIP2BQ9ULR5 123 aaKnown RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 CCNI2Q6ZMN8 369 aaPredicted RBP13.81□□□□□ -0.2
RNF43-201ENST00000407977 FAM20AQ96MK3 541 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 FOXP3Q9BZS1 431 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 ZWILCHQ9H900 591 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
RNF43-201ENST00000407977 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 DEAF1O75398 565 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 TBXAS1P24557 533 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 CCZ1BP86790 482 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 KNOP1Q1ED39 458 aaKnown RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 FLAD1Q8NFF5 587 aa13.8□□□□□ -0.2
RNF43-201ENST00000407977 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
RNF43-201ENST00000407977 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms