RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 VAT1LQ9HCJ6 419 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 F8VZ95 297 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 H0YGN5 161 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 TDP2O95551 362 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 FESP07332 822 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 HPDP32754 393 aaPredicted RBP17.75■□□□□ 0.43
CDK11B-204ENST00000407249 HSD17B3P37058 310 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 ARID5AQ03989 594 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 ACTN3Q08043 901 aaPredicted RBP17.75■□□□□ 0.43
CDK11B-204ENST00000407249 KLHL30Q0D2K2 578 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 COASYQ13057 564 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 PRPF4BQ13523 1007 aaKnown RBP17.75■□□□□ 0.43
CDK11B-204ENST00000407249 RAPGEF1Q13905 1077 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 RNF187Q5TA31 235 aaPredicted RBP17.75■□□□□ 0.43
CDK11B-204ENST00000407249 TRIM59Q8IWR1 403 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 ARFGAP2Q8N6H7 521 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 PHACTR1Q9C0D0 580 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 VCPKMTQ9H867 229 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 NFS1Q9Y697 457 aa17.75■□□□□ 0.43
CDK11B-204ENST00000407249 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
CDK11B-204ENST00000407249 MYZAPP0CAP1 466 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.433e-8■■■■■ 30.5
CDK11B-204ENST00000407249 THEMIS2Q5TEJ8 643 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 ARHGAP22Q7Z5H3 698 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 FAM133AQ8N9E0 248 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 CEP63Q96MT8 703 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 TMEM98Q9Y2Y6 226 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 BTNL10A8MVZ5 291 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 KCNK3O14649 394 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 MARSP56192 900 aaKnown RBP17.74■□□□□ 0.43
CDK11B-204ENST00000407249 CUL1Q13616 776 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 TAF4BQ92750 862 aa17.74■□□□□ 0.43
CDK11B-204ENST00000407249 PLCB4Q15147 1175 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 UAP1Q16222 522 aaPredicted RBP17.73■□□□□ 0.43
CDK11B-204ENST00000407249 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 CYFIP2Q96F07 1278 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 KANSL2Q9H9L4 492 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 PPANQ9NQ55 473 aaKnown RBP17.73■□□□□ 0.43
CDK11B-204ENST00000407249 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 PSME4Q14997 1843 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 GNA14O95837 355 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 SMTNP53814 917 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 MPP3Q13368 585 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 SEPT2Q15019 361 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
CDK11B-204ENST00000407249 ECM1Q16610 540 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 FAM26FQ5R3K3 315 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 CWF19L1Q69YN2 538 aaKnown RBP17.73■□□□□ 0.43
CDK11B-204ENST00000407249 ARMC9Q7Z3E5 817 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
CDK11B-204ENST00000407249 SIPA1L1O43166 1804 aa17.73■□□□□ 0.43
CDK11B-204ENST00000407249 ENTPD3O75355 529 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 CYP11B2P19099 503 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 USP11P51784 963 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 ACTRT1Q8TDG2 376 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 LRRC45Q96CN5 670 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 CENPHQ9H3R5 247 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 NYAP2Q9P242 653 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 SCN9AQ15858 1988 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 PNMA6FA0A0J9YX94 578 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 BHMG1C9JSJ3 638 aaPredicted RBP17.72■□□□□ 0.43
CDK11B-204ENST00000407249 KIF4AO95239 1232 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 FAM200BP0CF97 657 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 CHRNA5P30532 468 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 TRPC1P48995 793 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 ADCY7P51828 1080 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 ZNF844Q08AG5 666 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 NFIAQ12857 509 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 DRP2Q13474 957 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 ASIC2Q16515 512 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 OR2W6PQ8NHA6 318 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 MIPOL1Q8TD10 442 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 POLR3CQ9BUI4 534 aaPredicted RBP17.72■□□□□ 0.43
CDK11B-204ENST00000407249 FGFBP2Q9BYJ0 223 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 GANQ9H2C0 597 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
CDK11B-204ENST00000407249 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 RASSF9O75901 435 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 TMED1Q13445 227 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 DCAF4Q8WV16 495 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 PBKQ96KB5 322 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 RMDN2Q96LZ7 410 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.43
CDK11B-204ENST00000407249 SART1O43290 800 aaKnown RBP17.71■□□□□ 0.43
CDK11B-204ENST00000407249 ATP6V1G1O75348 118 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 CTNNA1P35221 906 aaKnown RBP17.71■□□□□ 0.43
CDK11B-204ENST00000407249 PTK2Q05397 1052 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 BIRC3Q13489 604 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK11B-204ENST00000407249 SAMD3Q8N6K7 520 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 LRRC57Q8N9N7 239 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 DHRS1Q96LJ7 313 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms