RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 CLPPQ16740 277 aaPredicted RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 PTPROQ16827 1216 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 PROSER3Q2NL68 480 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 ST13P4Q8IZP2 240 aaPredicted RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CKAP2Q8WWK9 683 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 BTBD7Q9P203 1132 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 ITGB1BP2Q9UKP3 347 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CHKBQ9Y259 395 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 NOC2LQ9Y3T9 749 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CCDC188H7C350 402 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CES2O00748 559 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 KCNQ3O43525 872 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CBX6O95503 412 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CDK4P11802 303 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 TXKP42681 527 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 EMP3P54852 163 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 GEMIN4P57678 1058 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CYLC2Q14093 348 aaPredicted RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 TDRD12Q587J7 1177 aaKnown RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 TNFAIP8L3Q5GJ75 292 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CCDC82Q8N4S0 544 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 SETDB2Q96T68 719 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 STMN4Q9H169 189 aaPredicted RBP9.39□□□□□ -0.91
RETREG1-202ENST00000399793 GOLPH3Q9H4A6 298 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 MMRN2Q9H8L6 949 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 CROTQ9UKG9 612 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 ZNF148Q9UQR1 794 aa9.39□□□□□ -0.91
RETREG1-202ENST00000399793 PSMA7O14818 248 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 PSMG1O95456 288 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 EYA4O95677 639 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ALDH2P05091 517 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 CLCN2P51788 898 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 POLGP54098 1239 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ITGA7Q13683 1181 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 MTFR1Q15390 333 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 RBM26Q5T8P6 1007 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 OTUD6AQ7L8S5 288 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 DIS3LQ8TF46 1054 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 LRRC37BQ96QE4 947 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 CRAMP1Q96RY5 1269 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 EIF3FO00303 357 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 IPO5O00410 1097 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 WNT7AO00755 349 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 RASGRF2O14827 1237 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 GH1P01241 217 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 NFKBIAP25963 317 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 GRIA2P42262 883 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 HALP42357 657 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 RASSF2P50749 326 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 VWA3BQ502W6 1294 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SATL1Q86VE3 508 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ZSCAN29Q8IWY8 852 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ARHGEF2Q92974 986 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SNX27Q96L92 541 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 PTTG2Q9NZH5 202 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 FAM196BA6NMK8 535 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 RBAK-RBAKDNI3L0D1 243 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 HOXB7P09629 217 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 EARS2Q5JPH6 523 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SLC2A7Q6PXP3 512 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 CCDC65Q8IXS2 484 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 TCHPQ9BT92 498 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SEMA4AQ9H3S1 761 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 TLE6Q9H808 572 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 KCNK9Q9NPC2 374 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 ZDHHC18Q9NUE0 388 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 DDX18Q9NVP1 670 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 SIK3Q9Y2K2 1263 aa9.38□□□□□ -0.91
RETREG1-202ENST00000399793 PARP4Q9UKK3 1724 aaKnown RBP9.38□□□□□ -0.91
RETREG1-202ENST00000399793 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 SIGLEC1Q9BZZ2 1709 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 BTBD19C9JJ37 291 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 OPHN1O60890 802 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 RNASEH1O60930 286 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 IFNAR1P17181 557 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 RFX5P48382 616 aaPredicted RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms