RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
MSL3-207ENST00000398527 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
MSL3-207ENST00000398527 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 TTC34A8MYJ7 566 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 TBC1D12O60347 775 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 DIAPH2O60879 1101 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 GYG1P46976 350 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 PNOCQ13519 176 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 FBXW10Q5XX13 1052 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 ARHGEF18Q6ZSZ5 1173 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 DGLUCYQ7Z3D6 616 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
MSL3-207ENST00000398527 EPS8L3Q8TE67 593 aaKnown RBP11.69□□□□□ -0.54
MSL3-207ENST00000398527 KAT2BQ92831 832 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 MOGAT1Q96PD6 335 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
MSL3-207ENST00000398527 CRAMP1Q96RY5 1269 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 MAN1B1Q9UKM7 699 aa11.69□□□□□ -0.54
MSL3-207ENST00000398527 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 A0A087WWV3 80 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 GPR25O00155 361 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 TEX28O15482 410 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ARHGAP6O43182 974 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ZSCAN12O43309 604 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 NMT2O60551 498 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ERLIN2O94905 339 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 PARP1P09874 1014 aaKnown RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 RXRAP19793 462 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 OXCT1P55809 520 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 INAQ16352 499 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 WLSQ5T9L3 541 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 SUPT20HQ8NEM7 779 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 FAM84BQ96KN1 310 aaPredicted RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 APBA2Q99767 749 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 TRIOBPQ9H2D6 2365 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 PRKAB2O43741 272 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 ZEB2O60315 1214 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 TSPAN1O60635 241 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 RPS6KA5O75582 802 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 RAD17O75943 681 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 CLIC6Q96NY7 704 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 ENAMQ9NRM1 1142 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 PFDN2Q9UHV9 154 aa11.68□□□□□ -0.54
MSL3-207ENST00000398527 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
MSL3-207ENST00000398527 TNKSO95271 1327 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 CHUKO15111 745 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 SERPINC1P01008 464 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 PNMA6AP0CW24 399 aaPredicted RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 WEE1P30291 646 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 KRT2P35908 639 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 CDK17Q00537 523 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 AKAP17AQ02040 695 aaKnown RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 ZC3H12BQ5HYM0 836 aaKnown RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 WDR44Q5JSH3 913 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 GRAMD2AQ8IUY3 354 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 C7orf57Q8NEG2 295 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 RASSF8Q8NHQ8 419 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
MSL3-207ENST00000398527 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
MSL3-207ENST00000398527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
MSL3-207ENST00000398527 STX10O60499 249 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 BMP6P22004 513 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 PLCD1P51178 756 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 IKQ13123 557 aaPredicted RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 USP38Q8NB14 1042 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 TNFRSF25Q93038 417 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 BATF3Q9NR55 127 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 NDFIP2Q9NV92 336 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 FKTNO75072 461 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms