RNA–Protein interactions for RNA: ENST00000368964.3

SETDB1-204, Transcript of SET domain bifurcated 1, humanhuman

TSL 5

Gene SETDB1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-204ENST00000368964 FAM86B2P0C5J1 330 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 TGFB3P10600 412 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 SELPP16109 830 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 IBSPP21815 317 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PSMA5P28066 241 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 ICAM3P32942 547 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 ZNF76P36508 570 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 DEFB103AP81534 67 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PTPN11Q06124 597 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 ITGB3BPQ13352 177 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 BFSP2Q13515 415 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 NEDD9Q14511 834 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 KCNV1Q6PIU1 500 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 TAS1R3Q7RTX0 852 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PRICKLE2Q7Z3G6 844 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 REXO1Q8N1G1 1221 aaKnown RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 MICALL1Q8N3F8 863 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 SAMD3Q8N6K7 520 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 USP38Q8NB14 1042 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 SLC17A8Q8NDX2 589 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 MAFAQ8NHW3 353 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 LMBR1Q8WVP7 490 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 GLG1Q92896 1179 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 CLP1Q92989 425 aaKnown RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 FAM49AQ9H0Q0 323 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 RNPEPQ9H4A4 650 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 ZNF576Q9H609 170 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 AGO4Q9HCK5 861 aaKnown RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 JPH1Q9HDC5 661 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 KCNH7Q9NS40 1196 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 GJB4Q9NTQ9 266 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 STXBP5LQ9Y2K9 1186 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PTPRSQ13332 1948 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 NID2Q14112 1375 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 TET1Q8NFU7 2136 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 XIRP2A4UGR9 3374 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 TRIP12Q14669 1992 aaPredicted RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 EPOPA6NHQ4 379 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 STAM2O75886 525 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 LARGE1O95461 756 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 CCNE2O96020 404 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 WEE1P30291 646 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SREBF1P36956 1147 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 AKAP17AQ02040 695 aaKnown RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 TMEM62Q0P6H9 643 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PPFIA1Q13136 1202 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 CCDC85BQ15834 202 aaPredicted RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 NTRK3Q16288 839 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PRR16Q569H4 304 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 KRT40Q6A162 431 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SERINC5Q86VE9 423 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SESTD1Q86VW0 696 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PLA2G4DQ86XP0 818 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SLC9A9Q8IVB4 645 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 NECAB1Q8N987 351 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 AFAP1L1Q8TED9 768 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PPP1R16BQ96T49 567 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PCYT2Q99447 389 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 MXRA8Q9BRK3 442 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 AGXT2Q9BYV1 514 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 EHMT1Q9H9B1 1298 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SLC9A2Q9UBY0 812 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 ZNF215Q9UL58 517 aaPredicted RBP6.92□□□□□ -1.3
SETDB1-204ENST00000368964 MTUS1Q9ULD2 1270 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 TPCN1Q9ULQ1 816 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 KCNJ14Q9UNX9 436 aa6.92□□□□□ -1.3
SETDB1-204ENST00000368964 SPTBN5Q9NRC6 3674 aaKnown RBP6.91□□□□□ -1.3
SETDB1-204ENST00000368964 CCDC196A0A1B0GTZ2 297 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 CPLX1O14810 134 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
SETDB1-204ENST00000368964 CHMP2AO43633 222 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 CSPG5O95196 566 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 ACTN1P12814 892 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 IGFBP4P22692 258 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 KCNJ6P48051 423 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 AK2P54819 239 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 NLRP5P59047 1200 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 PSMA6P60900 246 aaKnown RBP6.91□□□□□ -1.3
SETDB1-204ENST00000368964 ACTR2P61160 394 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 WDR5P61964 334 aaKnown RBP6.91□□□□□ -1.3
SETDB1-204ENST00000368964 SSRP1Q08945 709 aaKnown RBP6.91□□□□□ -1.3
SETDB1-204ENST00000368964 SCRN1Q12765 414 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 POU4F2Q12837 409 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 ADGRE1Q14246 886 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 TEAD4Q15561 434 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 GRIK4Q16099 956 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 CEP55Q53EZ4 464 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 XRRA1Q6P2D8 792 aa6.91□□□□□ -1.3
SETDB1-204ENST00000368964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms