RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 DAB1O75553 588 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MAPK4P31152 587 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TMPRSS15P98073 1019 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PARVGQ9HBI0 331 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RSL24D1Q9UHA3 163 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 P4HA2O15460 535 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SYF2O95926 243 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 TRIM45Q9H8W5 580 aaPredicted RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 VAT1LQ9HCJ6 419 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CD209Q9NNX6 404 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 JAK2O60674 1132 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 RBL2Q08999 1139 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 WDR60Q8WVS4 1066 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CARD14Q9BXL6 1004 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 DCAF8L1A6NGE4 600 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 ZRANB2O95218 330 aaKnown RBP eCLIP7□□□□□ -1.29
VPS13B-202ENST00000357162 BIRC2Q13490 618 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 KCTD16Q68DU8 428 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 ITPRIPL1Q6GPH6 555 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SPATA4Q8NEY3 305 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 MGARPQ8TDB4 240 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 A0A0D9SFI3 127 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 M0R3G1 203 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 GJC1P36383 396 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CAVIN3Q969G5 261 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 NEXMIFQ5QGS0 1516 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 ATP5J2-PTCD1G3V325 749 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 MTSS1O43312 755 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 XIAPP98170 497 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 RCN2Q14257 317 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 INAQ16352 499 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CCDC80Q76M96 950 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 ABTB1Q969K4 478 aaPredicted RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 C19orf60Q96EN9 201 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 VCPKMTQ9H867 229 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 EHD2Q9NZN4 543 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 OVOS2A0A0G2JMS6 1433 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 PDS5AQ29RF7 1337 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 H3BNX3 289 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TOMM70O94826 608 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 KRT75O95678 551 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SNX17Q15036 470 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SERPINB12Q96P63 405 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SNX5Q9Y5X3 404 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SQORQ9Y6N5 450 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 GTPBP10A4D1E9 387 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 ECE1P42892 770 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 MAGOHP61326 146 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 ADPGKQ9BRR6 497 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SEPT10Q9P0V9 454 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SNTNA6NMZ2 147 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 PSMA3P25788 255 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TNFRSF8P28908 595 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 HOXC9P31274 260 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 CCZ1BP86790 482 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CCZ1P86791 482 aaPredicted RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 OPTNQ96CV9 577 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 KLHL41O60662 606 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 MYL4P12829 197 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 SKIV2L2P42285 1042 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 DNAJC24Q6P3W2 148 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CYFIP1Q7L576 1253 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TRAPPC11Q7Z392 1133 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CEP70Q8NHQ1 597 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TSPAN17Q96FV3 270 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 CEP19Q96LK0 163 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 DHX36Q9H2U1 1008 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 COPEO14579 308 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TUBA4AP68366 448 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 MECOMQ03112 1051 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 DEPTORQ8TB45 409 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 TUBGCP3Q96CW5 907 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 EML4Q9HC35 981 aaKnown RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 WDR35Q9P2L0 1181 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 AP3M1Q9Y2T2 418 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 QRICH2Q9H0J4 1663 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 HIC1Q14526 733 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 PSMD6Q15008 389 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 FRMD5Q7Z6J6 570 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 OTUD7AQ8TE49 926 aaPredicted RBP7□□□□□ -1.29
VPS13B-202ENST00000357162 ZBTB3Q9H5J0 574 aa7□□□□□ -1.29
VPS13B-202ENST00000357162 PCM1Q15154 2024 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 NOP56O00567 594 aaKnown RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CSTF3Q12996 717 aaKnown RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MTHFD1LQ6UB35 978 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 C11orf57Q6ZUT1 292 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 IKBIPQ70UQ0 350 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CCNJLQ8IV13 435 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MAML1Q92585 1016 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 THAP11Q96EK4 314 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 KDM1AO60341 852 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FDX1P10109 184 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RMDN1Q96DB5 314 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TTC3P53804 2025 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms