RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TTC23LQ6PF05 361 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 PIGBQ92521 554 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 RPS6KA4O75676 772 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 LZICQ8WZA0 190 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 GCOM2Q9BZD3 368 aaPredicted RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 SAYSD1Q9NPB0 183 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 STAP1Q9ULZ2 295 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 MIF4GDA9UHW6 222 aaKnown RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 H3BRJ5 948 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 SEC31AO94979 1220 aaKnown RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 PADI6Q6TGC4 694 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 TRIM59Q8IWR1 403 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 PDCD6IPQ8WUM4 868 aaKnown RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 GPR101Q96P66 508 aaPredicted RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 NOVA2Q9UNW9 492 aaKnown RBP24.69■■□□□ 1.54
NPAS3-201ENST00000346562 PLEKHG2Q9H7P9 1386 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 PRAMEF22A3QJZ6 481 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 HADHAP40939 763 aa24.69■■□□□ 1.54
NPAS3-201ENST00000346562 L3MBTL1Q9Y468 752 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 MAPK13O15264 365 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 KRT38O76015 456 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 PLEKHA8P1O95397 391 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 FSCBQ5H9T9 825 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 XXYLT1Q8NBI6 393 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 ZBBXA8MT70 800 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 CCDC188H7C350 402 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 TTC8Q8TAM2 541 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 PIGOQ8TEQ8 1089 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 CNOT8Q9UFF9 292 aaKnown RBP24.68■■□□□ 1.54
NPAS3-201ENST00000346562 ANAPC7Q9UJX3 599 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 SFI1A8K8P3 1242 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 HABP4Q5JVS0 413 aaKnown RBP24.68■■□□□ 1.54
NPAS3-201ENST00000346562 ACAD11Q709F0 780 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 TTC30BQ8N4P2 665 aa24.68■■□□□ 1.54
NPAS3-201ENST00000346562 SUGT1Q9Y2Z0 365 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 PTCH1Q13635 1447 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 PROM2Q8N271 834 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 RAD54LQ92698 747 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 TRIM62Q9BVG3 475 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 NRBP1Q9UHY1 535 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 ERBB3P21860 1342 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 EEF1DP29692 281 aaKnown RBP24.67■■□□□ 1.54
NPAS3-201ENST00000346562 FGGP02679 453 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 KYAT1Q16773 422 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 RCSD1Q6JBY9 416 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 NEUROG2Q9H2A3 272 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 GDAQ9Y2T3 454 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 SYNMO15061 1565 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 ZNF335Q9H4Z2 1342 aaPredicted RBP24.67■■□□□ 1.54
NPAS3-201ENST00000346562 M0QYV0 167 aa24.67■■□□□ 1.54
NPAS3-201ENST00000346562 E5RI56 91 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 CAV1Q03135 178 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 LCA5Q86VQ0 697 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 SH3TC2Q8TF17 1288 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 ACTR5Q9H9F9 607 aaPredicted RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 DEUP1Q05D60 604 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 CAPRIN1Q14444 709 aaKnown RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 KLHL38Q2WGJ6 581 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 ULK4Q96C45 1275 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 METP08581 1390 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 CCDC151A5D8V7 595 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 NR3C1P04150 777 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 WDR75Q8IWA0 830 aaKnown RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 SP110Q9HB58 689 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 USP17L10C9JJH3 530 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 ZNF189O75820 626 aaPredicted RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 ORC2Q13416 577 aaPredicted RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 DCTN3O75935 186 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 KRT31Q15323 416 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 ITPRIPL1Q6GPH6 555 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 TTLL11Q8NHH1 800 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 FAM20AQ96MK3 541 aa24.66■■□□□ 1.54
NPAS3-201ENST00000346562 MRPL40Q9NQ50 206 aaKnown RBP24.66■■□□□ 1.54
NPAS3-201ENST00000346562 FAM95CA0A1B0GW59 222 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SMARCA1P28370 1054 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SDC4P31431 198 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 GPC5P78333 572 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 ZBTB17Q13105 803 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 ZNF394Q53GI3 561 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 COPS2P61201 443 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 RESTQ13127 1097 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 RESP18Q5W5W9 173 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SFR1Q86XK3 245 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 TMPRSS15P98073 1019 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 RHPN2Q8IUC4 686 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 FAM213AQ9BRX8 229 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 TRIM55Q9BYV6 548 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SUDS3Q9H7L9 328 aaPredicted RBP24.65■■□□□ 1.54
NPAS3-201ENST00000346562 CREB3O43889 395 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 CYP2E1P05181 493 aaPredicted RBP24.65■■□□□ 1.54
NPAS3-201ENST00000346562 NR1D1P20393 614 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 PPP4R4Q6NUP7 873 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 TMEM270Q6UE05 265 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SCOCQ9UIL1 159 aa24.65■■□□□ 1.54
NPAS3-201ENST00000346562 SPARCL1Q14515 664 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 PTPN21Q16825 1174 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 PFKFB3Q16875 520 aaPredicted RBP24.64■■□□□ 1.54
NPAS3-201ENST00000346562 LRRC37BQ96QE4 947 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 TRPV6Q9H1D0 765 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms