RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 TRIM31Q9BZY9 425 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 TXLNGQ9NUQ3 528 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 RABGAP1Q9Y3P9 1069 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 ZMYM6O95789 1325 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 A8MX80 341 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 GM2AP17900 193 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 HOXD13P35453 343 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 NR1I3Q14994 352 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
TPX2-202ENST00000340513 NEK5Q6P3R8 708 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 DACT3Q96B18 629 aaPredicted RBP12.8□□□□□ -0.36
TPX2-202ENST00000340513 CGREF1Q99674 301 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 MTFR1LQ9H019 292 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 KCNK9Q9NPC2 374 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 ABHD10Q9NUJ1 306 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 VWDEQ8N2E2 1590 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 ADCY6O43306 1168 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 DCTN3O75935 186 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 GYPCP04921 128 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 ANXA13P27216 316 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 SLCO1A2P46721 670 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 SPA17Q15506 151 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 IZUMO2Q6UXV1 221 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 G2E3Q7L622 706 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 CLVS1Q8IUQ0 354 aaPredicted RBP12.8□□□□□ -0.36
TPX2-202ENST00000340513 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 NPLOC4Q8TAT6 608 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 ENOX1Q8TC92 643 aaKnown RBP12.8□□□□□ -0.36
TPX2-202ENST00000340513 CALML6Q8TD86 181 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 GAB3Q8WWW8 586 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 XAB2Q9HCS7 855 aaKnown RBP12.8□□□□□ -0.36
TPX2-202ENST00000340513 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
TPX2-202ENST00000340513 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 FAM47E-STBD1D6RA91 191 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 KRT36O76013 467 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 CAPN1P07384 714 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 CHRNB1P11230 501 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 LTKP29376 864 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 GPC3P51654 580 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 FASTKD5Q7L8L6 764 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 GATA6Q92908 595 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 TTC1Q99614 292 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 ZNF184Q99676 751 aaPredicted RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 GLRX3O76003 335 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 BBS9Q3SYG4 887 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 RESP18Q5W5W9 173 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 PMEPA1Q969W9 287 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 PBKQ96KB5 322 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 LACRTQ9GZZ8 138 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 ANKRD34BA5PLL1 514 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 RNF113AO15541 343 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 ETFBP38117 255 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 KHDC1Q4VXA5 237 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 DAB2IPQ5VWQ8 1189 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 NCSTNQ92542 709 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 CDK5RAP3Q96JB5 506 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 RNF38Q9H0F5 515 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 CEP72Q9P209 647 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 TTC7AQ9ULT0 858 aaPredicted RBP12.79□□□□□ -0.36
TPX2-202ENST00000340513 GPSM3Q9Y4H4 160 aa12.79□□□□□ -0.36
TPX2-202ENST00000340513 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 SNX3O60493 162 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 ADAM17P78536 824 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 STK4Q13043 487 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 FLIIQ13045 1269 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 SUZ12Q15022 739 aaKnown RBP12.78□□□□□ -0.36
TPX2-202ENST00000340513 NECTIN1Q15223 517 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
TPX2-202ENST00000340513 KIAA2013Q8IYS2 634 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
TPX2-202ENST00000340513 CALN1Q9BXU9 219 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 KLHL25Q9H0H3 589 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 SEPT10Q9P0V9 454 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
TPX2-202ENST00000340513 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 TMCC3Q9ULS5 477 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
TPX2-202ENST00000340513 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
TPX2-202ENST00000340513 KRT4P19013 534 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms