RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 SMC1BQ8NDV3 1235 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 ERP27Q96DN0 273 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 BCAS3Q9H6U6 928 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 HAO1Q9UJM8 370 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 PDS5AQ29RF7 1337 aaKnown RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 NUP98P52948 1817 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ZFXP17010 805 aaPredicted RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 UBA7P41226 1012 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ZBTB16Q05516 673 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 MEA1Q16626 185 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ZNF653Q96CK0 615 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 THAP9Q9H5L6 903 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 DISC1Q9NRI5 854 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 DBR1Q9UK59 544 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 LRCH1Q9Y2L9 728 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 DUOX1Q9NRD9 1551 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 AFF2P51816 1311 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 EDIL3O43854 480 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ENTPD5O75356 428 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ATF3P18847 181 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 VHLP40337 213 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 LRRC41Q15345 812 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 TXNRD1Q16881 649 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 CCDC152Q4G0S7 254 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 MIGA2Q7L4E1 593 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 SMC6Q96SB8 1091 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 CYTH2Q99418 400 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 TFCP2L1Q9NZI6 479 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 PDP2Q9P2J9 529 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 MTRF1LQ9UGC7 380 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 FAF1Q9UNN5 650 aaPredicted RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 FLT1P17948 1338 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 PNPLA7Q6ZV29 1317 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 MYH3P11055 1940 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 RASGRF2O14827 1237 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 TTI1O43156 1089 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 SNX3O60493 162 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 FGFR1OPO95684 399 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 SEPT7Q16181 437 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 TMEM110Q86TL2 294 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ZNF34Q8IZ26 560 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 ST13P4Q8IZP2 240 aaPredicted RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 WDR60Q8WVS4 1066 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 C17orf50Q8WW18 174 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 PACSIN1Q9BY11 444 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 CELF4Q9BZC1 486 aaKnown RBP10.01□□□□□ -0.81
RPGR-202ENST00000339363 LNPEPQ9UIQ6 1025 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
RPGR-202ENST00000339363 MAGEB6P1A0A0J9YX57 407 aa10□□□□□ -0.81
RPGR-202ENST00000339363 A0A1W2PQC6 194 aa10□□□□□ -0.81
RPGR-202ENST00000339363 M0R2N6 131 aa10□□□□□ -0.81
RPGR-202ENST00000339363 PGRMC1O00264 195 aaKnown RBP10□□□□□ -0.81
RPGR-202ENST00000339363 ABLIM1O14639 778 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SRGNP10124 158 aa10□□□□□ -0.81
RPGR-202ENST00000339363 PLCG1P19174 1290 aa10□□□□□ -0.81
RPGR-202ENST00000339363 ASIC1P78348 528 aa10□□□□□ -0.81
RPGR-202ENST00000339363 IFI35P80217 286 aaPredicted RBP10□□□□□ -0.81
RPGR-202ENST00000339363 UBAP2Q5T6F2 1119 aaKnown RBP10□□□□□ -0.81
RPGR-202ENST00000339363 SNX30Q5VWJ9 437 aa10□□□□□ -0.81
RPGR-202ENST00000339363 BRINP3Q76B58 766 aa10□□□□□ -0.81
RPGR-202ENST00000339363 PEX26Q7Z412 305 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SPATA24Q86W54 205 aa10□□□□□ -0.81
RPGR-202ENST00000339363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10□□□□□ -0.81
RPGR-202ENST00000339363 OCEL1Q9H607 264 aa10□□□□□ -0.81
RPGR-202ENST00000339363 CYP39A1Q9NYL5 469 aa10□□□□□ -0.81
RPGR-202ENST00000339363 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
RPGR-202ENST00000339363 E2F6O75461 281 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SCG2P13521 617 aa10□□□□□ -0.81
RPGR-202ENST00000339363 FLT3P36888 993 aa10□□□□□ -0.81
RPGR-202ENST00000339363 RCN1Q15293 331 aa10□□□□□ -0.81
RPGR-202ENST00000339363 CCDC80Q76M96 950 aa10□□□□□ -0.81
RPGR-202ENST00000339363 KCNK18Q7Z418 384 aa10□□□□□ -0.81
RPGR-202ENST00000339363 TTC8Q8TAM2 541 aa10□□□□□ -0.81
RPGR-202ENST00000339363 MMTAG2Q9BU76 263 aaKnown RBP10□□□□□ -0.81
RPGR-202ENST00000339363 PITPNM3Q9BZ71 974 aa10□□□□□ -0.81
RPGR-202ENST00000339363 MIS12Q9H081 205 aa10□□□□□ -0.81
RPGR-202ENST00000339363 GSTTP1A0A1W2PQM5 241 aa10□□□□□ -0.81
RPGR-202ENST00000339363 LRRC53A6NM62 1247 aa10□□□□□ -0.81
RPGR-202ENST00000339363 KLHDC7AQ5VTJ3 777 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SCG3Q8WXD2 468 aaKnown RBP10□□□□□ -0.81
RPGR-202ENST00000339363 ESR2Q92731 530 aa10□□□□□ -0.81
RPGR-202ENST00000339363 LRRC37BQ96QE4 947 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
RPGR-202ENST00000339363 SNX24Q9Y343 169 aa10□□□□□ -0.81
RPGR-202ENST00000339363 TLR2O60603 784 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 UQCRFS1P1P0C7P4 283 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 SLC5A1P13866 664 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PDE4DQ08499 809 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 UAP1Q16222 522 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms