RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 TAS2R14Q9NYV8 317 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 ASTN1O14525 1302 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 LMNB1P20700 586 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 TMEM179Q6ZVK1 233 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 SP8Q8IXZ3 490 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 SORBS3O60504 671 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 CTNND1O60716 968 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 EYA4O95677 639 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 CBWD6Q4V339 395 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 CBWD3Q5JTY5 395 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 CBWD5Q5RIA9 395 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 KDM7AQ6ZMT4 941 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 RUBCNQ92622 972 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 SCN7AQ01118 1682 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC169A6NNP5 214 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 MEFVO15553 781 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 POLR2MP0CAP2 368 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 POLD1P28340 1107 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 STAT2P52630 851 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 MTMR3Q13615 1198 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 DENND2CQ68D51 928 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 ETNPPLQ8TBG4 499 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 ARHGEF26Q96DR7 871 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 RAB17Q9H0T7 212 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 ACP6Q9NPH0 428 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 PRR12Q9ULL5 1215 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
HMGCS1-201ENST00000325110 A6NNZ2 444 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 DCDC2CA8MYV0 355 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC188H7C350 402 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 PPP1R7Q15435 360 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 TUBB8Q3ZCM7 444 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC38Q502W7 563 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 MMS22LQ6ZRQ5 1243 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 PALB2Q86YC2 1186 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 ACER1Q8TDN7 264 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 PLCB1Q9NQ66 1216 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 HOXD13P35453 343 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 SNX1Q13596 522 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 CRY2Q49AN0 593 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 RFFLQ8WZ73 363 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 KAT2BQ92831 832 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
HMGCS1-201ENST00000325110 FTLP02792 175 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 MMP10P09238 476 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 SLC20A2Q08357 652 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 ZNF844Q08AG5 666 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 C15orf52Q6ZUT6 534 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 OTUD6AQ7L8S5 288 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 ZNF572Q7Z3I7 529 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 LNX1Q8TBB1 728 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 FBXO28Q9NVF7 368 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 EMSYQ7Z589 1322 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 F8VZ95 297 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 BCRP11274 1271 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 KRT5P13647 590 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 GAP43P17677 238 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 KCNJ1P48048 391 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 TRIP13Q15645 432 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 CACNA2D3Q8IZS8 1091 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 LXNQ9BS40 222 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 MLXIPLQ9NP71 852 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 IGSF9BQ9UPX0 1349 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 RGS16O15492 202 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 MYCLP12524 364 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 HSPA9P38646 679 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 PPP2R2AP63151 447 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 SKOR1P84550 965 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 NT5DC3Q86UY8 548 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 PIK3R5Q8WYR1 880 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
HMGCS1-201ENST00000325110 TGFB1I1O43294 461 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 FGFR4P22455 802 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 HYIQ5T013 277 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 UBL4BQ8N7F7 174 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM114A2Q9NRY5 505 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 HIP1RO75146 1068 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms