RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 FGFR1OP2Q9NVK5 253 aa21.71■■□□□ 1.07
CACNA1B-201ENST00000277549 CMA1P23946 247 aa21.71■■□□□ 1.07
CACNA1B-201ENST00000277549 SPATA2LQ8IUW3 424 aaPredicted RBP21.71■■□□□ 1.07
CACNA1B-201ENST00000277549 RUNDC3BQ96NL0 473 aa21.71■■□□□ 1.07
CACNA1B-201ENST00000277549 POLR3FQ9H1D9 316 aaPredicted RBP21.71■■□□□ 1.07
CACNA1B-201ENST00000277549 ADCK5Q3MIX3 580 aa21.7■■□□□ 1.07
CACNA1B-201ENST00000277549 PKN3Q6P5Z2 889 aa21.7■■□□□ 1.07
CACNA1B-201ENST00000277549 RNF25Q96BH1 459 aaPredicted RBP21.7■■□□□ 1.07
CACNA1B-201ENST00000277549 ZNF212Q9UDV6 495 aa21.7■■□□□ 1.07
CACNA1B-201ENST00000277549 ANAPC7Q9UJX3 599 aa21.7■■□□□ 1.07
CACNA1B-201ENST00000277549 CSE1LP55060 971 aaKnown RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 WASHC5Q12768 1159 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 RRM2BQ7LG56 351 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 KLHL11Q9NVR0 708 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 HOXC10Q9NYD6 342 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 PNMA6FA0A0J9YX94 578 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 AKT1P31749 480 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 ST8SIA6P61647 398 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TMPRSS15P98073 1019 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 DR1Q01658 176 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 GTF2H3Q13889 308 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 ZSCAN26Q16670 478 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 FAM160B2Q86V87 743 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TRIM15Q9C019 465 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 DHX36Q9H2U1 1008 aaKnown RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TRAF3IP3Q9Y228 551 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L15C9J2P7 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L13C9JLJ4 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L11C9JVI0 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L18D6R9N7 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L22D6RA61 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L17D6RBQ6 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L19D6RCP7 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L20D6RJB6 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 CYP2B6P20813 491 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L24Q0WX57 530 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 GRAPQ13588 217 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L6PQ6QN14 398 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 GRAPLQ8TC17 118 aaPredicted RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 VPS39Q96JC1 886 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 KLC2Q9H0B6 622 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TMEM63CQ9P1W3 806 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 NOVA2Q9UNW9 492 aaKnown RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 PCDHA13Q9Y5I0 950 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 LRRC53A6NM62 1247 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 MUC3BQ9H195 1237 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TOPORSQ9NS56 1045 aaPredicted RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 WARS2Q9UGM6 360 aaKnown RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 FAM47DPA6NHR8 397 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TDRD7Q8NHU6 1098 aaKnown RBP21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 AIFM3Q96NN9 605 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 SLC13A1Q9BZW2 595 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 SELENONQ9NZV5 590 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 TJP2Q9UDY2 1190 aa21.7■■□□□ 1.06
CACNA1B-201ENST00000277549 PRAG1Q86YV5 1406 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 PKP1Q13835 747 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 DPF3Q92784 378 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 ZNF658Q5TYW1 1059 aaPredicted RBP21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 TTC8Q8TAM2 541 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 PACSIN2Q9UNF0 486 aaPredicted RBP21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 HOXB7P09629 217 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 KCNA2P16389 499 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 ESRRGP62508 458 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 TJAP1Q5JTD0 557 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 SIX5Q8N196 739 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 KIZQ2M2Z5 673 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 SPDYAQ5MJ70 313 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 PCDHB6Q9Y5E3 794 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 CHRNA5P30532 468 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 SEPT2Q15019 361 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 LRRC8AQ8IWT6 810 aa21.69■■□□□ 1.06
CACNA1B-201ENST00000277549 LMBRD1Q9NUN5 540 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 RGL1Q9NZL6 768 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 AIPL1Q9NZN9 384 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 PRAMEP78395 509 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 ZNF235Q14590 738 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 RGS9BPQ6ZS82 235 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 TRIM42Q8IWZ5 723 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 PPP1R13BQ96KQ4 1090 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 CARMIL3Q8ND23 1372 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 POTEMA6NI47 508 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 ERFP50548 548 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 IQANK1A0A1B0GTG1 560 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 USP17L10C9JJH3 530 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 CHCHD3Q9NX63 227 aaKnown RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 RAPGEF6Q8TEU7 1601 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 WDR62O43379 1518 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 CYBBP04839 570 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 HSPA8P11142 646 aaKnown RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 PMS1P54277 932 aaKnown RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 SURF1Q15526 300 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 TADA2BQ86TJ2 420 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 DHX35Q9H5Z1 703 aaKnown RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 ABCC12Q96J65 1359 aa21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 TRIM45Q9H8W5 580 aaPredicted RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 MAP3K20Q9NYL2 800 aaKnown RBP21.68■■□□□ 1.06
CACNA1B-201ENST00000277549 PGRMC1O00264 195 aaKnown RBP21.67■■□□□ 1.06
CACNA1B-201ENST00000277549 ESRRAP11474 423 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms