RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Tceal1Q921P9 165 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tcp11x2A2AEI7 503 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Lrrc63A6H694 637 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Polr3eQ9CZT4 710 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tgm5Q9D7I9 724 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tlr2Q9QUN7 784 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Neurl4Q5NCX5 1563 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 6030498E09RikB1AX85 169 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 PpargP37238 505 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Hdac10Q6P3E7 666 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Smg5Q6ZPY2 1017 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Best2Q8BGM5 508 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Trim9Q8C7M3 817 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Trim16Q99PP9 556 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm7356A0A087WSA6 508 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Clrn2B2RVW2 232 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ifnb1P01575 182 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Vps4bP46467 444 aaKnown RBP16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 RnaselQ05921 735 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Edem3Q2HXL6 931 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Q3TQQ9 903 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ttf2Q5NC05 1138 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 FcgrtQ61559 365 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ap3m2Q8R2R9 418 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Cmtm5Q9D6G9 156 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Osbpl9A2A8Z1 736 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Mup5P11591 180 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Cep95Q8BVV7 827 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ipo11Q8K2V6 975 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Cse1lQ9ERK4 971 aaKnown RBP16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Trim54Q9ERP3 366 aa16.56■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Serpina16D3Z660 418 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Top3aO70157 1003 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 AgtP11859 477 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Slc1a1P51906 523 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Znf827Q505G8 1078 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 UrgcpQ5NCI0 926 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Znf148Q61624 794 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Arfip2Q8K221 341 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gpsm2Q8VDU0 679 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rtn3Q9ES97 964 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Itga2bQ9QUM0 1033 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rnf4Q9QZS2 194 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Adam22Q9R1V6 904 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Kif9Q9WV04 790 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Zmynd8A2A484 1235 aaKnown RBP16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 PighQ5M9N4 188 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Itih3Q61704 889 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Suds3Q8BR65 328 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Dnajc3Q91YW3 504 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rabgef1Q9JM13 491 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Acot3Q9QYR7 432 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rtl9Q32KG4 1339 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Crnkl1P63154 690 aaKnown RBP16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Carmil2Q3V3V9 1296 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Serpinb6Q60854 378 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Afg3l1Q920A7 789 aaKnown RBP16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Myo1hQ9D6A1 958 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gtf2ird1Q9JI57 1104 aaKnown RBP16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Krt1P04104 637 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 HiraQ61666 1015 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Olfr119Q7TRJ5 321 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Abi1Q8CBW3 481 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Anapc7Q9WVM3 565 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Zfp212G3X8R7 492 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 StrnO55106 780 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 SftpbP50405 377 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Foxn3Q499D0 457 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm13103Q4VAD2 491 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Baiap3Q80TT2 1134 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rhobtb3Q9CTN4 611 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Fam84aQ9D650 292 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Extl3Q9WVL6 918 aa16.55■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ttll10A4Q9F3 704 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm382B1AXN3 1250 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Nmt2O70311 529 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 CrkQ64010 304 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rnf168Q80XJ2 565 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ppp4r4Q8C0Y0 875 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Cog4Q8R1U1 785 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ap2b1Q9DBG3 937 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Itpripl1A2ASA8 547 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ugt1a6bK9J7B2 531 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Grem2O88273 168 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Stam2O88811 523 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Olfr121Q5CZY0 321 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ugt1a6Q64435 531 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rab3ipQ68EF0 428 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Armcx2Q6A058 784 aaKnown RBP16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ugt1a7cQ6ZQM8 531 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm5622Q810Q0 167 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 SybuQ8BHS8 665 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tmem132cQ8CEF9 1099 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Fam20aQ8CID3 541 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 CenpkQ9ESN5 271 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ccdc22Q9JIG7 627 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Nek3Q9R0A5 511 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Prdm2A2A7B5 1709 aaKnown RBP16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Lrrc38A2VDH3 298 aa16.54■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Spc25Q3UA16 226 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms