RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 CkmP07310 381 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Arf4P61750 180 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Map4k1P70218 827 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rnpc3Q3UZ01 514 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Eif1aQ60872 144 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 OcrlQ6NVF0 900 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Eif1axQ8BMJ3 144 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ankrd52Q8BTI7 1076 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ddx39aQ8VDW0 427 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trim59Q922Y2 403 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Krt84Q99M73 603 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pno1Q9CPS7 248 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tex46Q9CPU3 165 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pmepa1Q9D7R2 260 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Clec3aQ9EPW4 196 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 FarsbQ9WUA2 589 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm29133A0A1B0GT72 266 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 TriqkB2B9E1 86 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Apol6B7ZC55 329 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Masp1P98064 704 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 IqcmQ149I8 489 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Klf4Q60793 483 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CstbQ62426 98 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 DgkbQ6NS52 802 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sra1Q80VJ2 232 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 RragaQ80X95 313 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Exoc3l1Q8BI71 739 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sgsm1Q8BPQ7 1093 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Brms1Q99N20 246 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 TtpalQ9D3D0 343 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cep164Q5DU05 1446 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CenpjQ569L8 1344 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 PapolaQ61183 739 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 UnkQ8BL48 810 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 BroxQ8K2Q7 411 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 KarsQ99MN1 595 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Trim16Q99PP9 556 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ttc14Q9CSP9 761 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cyc1Q9D0M3 325 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gfpt1P47856 697 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pcdhb7Q8CDY9 829 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dlgap5Q8K4R9 808 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tex9Q9D845 387 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ripk4Q9ERK0 786 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc8a3S4R2P9 928 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Maml3D4QGC2 1135 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Matn2O08746 956 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gdap1O88741 358 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Bmi1P25916 324 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Uspl1Q3ULM6 1089 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 DeptorQ570Y9 409 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc10a7Q5PT53 340 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rapgef3Q8VCC8 918 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Brinp1Q920P3 760 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Stk4Q9JI11 487 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 H2-BlV9GXR0 257 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Baz1bQ9Z277 1479 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gm20792A0A087WRF5 222 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gm28490A0A087WRT9 222 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rnf169E9Q7F2 694 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dsg2O55111 1122 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gbx2P48031 348 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gabpb1Q00420 383 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 GabpaQ00422 454 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cyp24a1Q64441 514 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Scaf4Q6PFF0 1209 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Actr5Q80US4 605 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmem169Q8BG50 297 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Plekhm3Q8BM47 761 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 As3mtQ91WU5 376 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pomgnt1Q91X88 660 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mccc1Q99MR8 717 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ska1Q9CPV1 254 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Homer2Q9QWW1 354 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Add1Q9QYC0 735 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zscan29E9Q5B4 869 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc4a3P16283 1227 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Etv1P41164 477 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Stat5bP42232 786 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zap70P43404 618 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ftl2P49945 183 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 OsbpQ3B7Z2 805 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 RilpQ5ND29 369 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cotl1Q9CQI6 142 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nkiras2Q9CR56 191 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Chchd3Q9CRB9 227 aaKnown RBP9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zbtb8aQ9CWH1 434 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ttyh1Q9D3A9 450 aa9.58□□□□□ -0.88
Clcn3-202ENSMUST00000056508 1700031M16RikA0A087WSH0 82 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ttll13A4Q9F6 804 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mtatp6P00848 226 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Vcam1P29533 739 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rnf19aP50636 840 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 4930502E18RikQ14BQ3 236 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Fut11Q8BHC9 489 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pcdhga4Q91XY4 930 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Limd1Q9QXD8 668 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rap1gds1E9Q912 607 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Hk2O08528 917 aaKnown RBP9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Scarb2O35114 478 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms