RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 LDS1P31379 325 aa1.72□□□□□ -2.13
snR54snR54 SHE1P38200 338 aa1.72□□□□□ -2.13
snR54snR54 RPS14BP39516 138 aaKnown RBP1.72□□□□□ -2.13
snR54snR54 RPN14P53196 417 aa1.72□□□□□ -2.13
snR54snR54 YGR015CP53208 328 aa1.72□□□□□ -2.13
snR54snR54 NOP6Q07623 225 aaKnown RBP1.72□□□□□ -2.13
snR54snR54 YDL109CQ12103 647 aa1.72□□□□□ -2.13
snR54snR54 LDB17Q12342 491 aa1.72□□□□□ -2.13
snR54snR54 RPL23AP0CX41 137 aaKnown RBP1.71□□□□□ -2.14
snR54snR54 RPL23BP0CX42 137 aaKnown RBP1.71□□□□□ -2.14
snR54snR54 PMT2P31382 759 aa1.71□□□□□ -2.14
snR54snR54 SPS19P32573 292 aaKnown RBP1.71□□□□□ -2.14
snR54snR54 AST1P35183 429 aa1.71□□□□□ -2.14
snR54snR54 PTK1P36002 662 aaPredicted RBP1.71□□□□□ -2.14
snR54snR54 FRM2P37261 193 aa1.71□□□□□ -2.14
snR54snR54 YHR177WP38867 453 aa1.71□□□□□ -2.14
snR54snR54 SPO73P40031 143 aa1.71□□□□□ -2.14
snR54snR54 YIR035CP40579 254 aa1.71□□□□□ -2.14
snR54snR54 STB1P42845 420 aa1.71□□□□□ -2.14
snR54snR54 YJR054WP47114 497 aa1.71□□□□□ -2.14
snR54snR54 RTT102P53330 157 aa1.71□□□□□ -2.14
snR54snR54 ZRG17P53735 605 aa1.71□□□□□ -2.14
snR54snR54 MRX8Q05473 314 aa1.71□□□□□ -2.14
snR54snR54 GPM3Q12326 303 aa1.71□□□□□ -2.14
snR54snR54 APC2Q12440 853 aa1.71□□□□□ -2.14
snR54snR54 FUS3P16892 353 aaKnown RBP1.7□□□□□ -2.14
snR54snR54 ZIP1P31111 875 aa1.7□□□□□ -2.14
snR54snR54 DBF4P32325 704 aa1.7□□□□□ -2.14
snR54snR54 LTV1P34078 463 aa1.7□□□□□ -2.14
snR54snR54 COS9P36034 407 aa1.7□□□□□ -2.14
snR54snR54 SPP381P38282 291 aaPredicted RBP1.7□□□□□ -2.14
snR54snR54 TRR2P38816 342 aa1.7□□□□□ -2.14
snR54snR54 MNL1P38888 796 aa1.7□□□□□ -2.14
snR54snR54 YDR541CQ03049 344 aa1.7□□□□□ -2.14
snR54snR54 MIR1P23641 311 aaKnown RBP1.69□□□□□ -2.14
snR54snR54 CBF5P33322 483 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
snR54snR54 SHE3P38272 425 aaKnown RBP1.69□□□□□ -2.14
snR54snR54 NAB3P38996 802 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
snR54snR54 VPS72Q03388 795 aa1.69□□□□□ -2.14
snR54snR54 INP2Q03824 705 aa1.69□□□□□ -2.14
snR54snR54 YLH47Q06493 454 aa1.69□□□□□ -2.14
snR54snR54 NDL1Q06568 189 aa1.69□□□□□ -2.14
snR54snR54 YOL029CQ08187 201 aa1.69□□□□□ -2.14
snR54snR54 HRT1Q08273 121 aa1.69□□□□□ -2.14
snR54snR54 AAD15Q08361 143 aa1.69□□□□□ -2.14
snR54snR54 SLT2Q00772 484 aa1.68□□□□□ -2.14
snR54snR54 SPC19Q03954 165 aa1.68□□□□□ -2.14
snR54snR54 API2Q04413 109 aa1.68□□□□□ -2.14
snR54snR54 SAL1D6W196 494 aa1.67□□□□□ -2.14
snR54snR54 SKG6P32900 734 aaPredicted RBP1.67□□□□□ -2.14
snR54snR54 SRB2P34162 210 aa1.67□□□□□ -2.14
snR54snR54 YIL059CP40520 121 aa1.67□□□□□ -2.14
snR54snR54 AIM23P47015 356 aa1.67□□□□□ -2.14
snR54snR54 CWC22P53333 577 aaKnown RBP1.67□□□□□ -2.14
snR54snR54 SED5Q01590 340 aa1.67□□□□□ -2.14
snR54snR54 FAR10Q06001 478 aa1.67□□□□□ -2.14
snR54snR54 GAS2Q06135 555 aa1.67□□□□□ -2.14
snR54snR54 RRP7P25368 297 aaPredicted RBP1.66□□□□□ -2.14
snR54snR54 KAP104P38217 918 aaKnown RBP1.66□□□□□ -2.14
snR54snR54 COS4P43542 379 aa1.66□□□□□ -2.14
snR54snR54 GYL1Q04322 720 aa1.66□□□□□ -2.14
snR54snR54 SLM3Q12093 417 aa1.66□□□□□ -2.14
snR54snR54 YDL211CQ12121 372 aa1.66□□□□□ -2.14
snR54snR54 COX10P21592 462 aa1.65□□□□□ -2.15
snR54snR54 BDH1P39714 382 aa1.65□□□□□ -2.15
snR54snR54 UFE1P41834 346 aa1.65□□□□□ -2.15
snR54snR54 YJL144WP47009 104 aa1.65□□□□□ -2.15
snR54snR54 SCS7Q03529 384 aa1.65□□□□□ -2.15
snR54snR54 MMT2Q08970 484 aa1.65□□□□□ -2.15
snR54snR54 SPE3Q12074 293 aaKnown RBP1.65□□□□□ -2.15
snR54snR54 DET1Q99288 334 aaKnown RBP1.65□□□□□ -2.15
snR54snR54 STE2D6VTK4 431 aa1.64□□□□□ -2.15
snR54snR54 CKA2P19454 339 aa1.64□□□□□ -2.15
snR54snR54 MRPL8P22353 238 aa1.64□□□□□ -2.15
snR54snR54 SSE1P32589 693 aaKnown RBP1.64□□□□□ -2.15
snR54snR54 MLH1P38920 769 aa1.64□□□□□ -2.15
snR54snR54 GGC1P38988 300 aa1.64□□□□□ -2.15
snR54snR54 YJR030CP47101 745 aa1.64□□□□□ -2.15
snR54snR54 IPK1Q06667 281 aa1.64□□□□□ -2.15
snR54snR54 SHS1Q07657 551 aa1.64□□□□□ -2.15
snR54snR54 RPN5Q12250 445 aaKnown RBP1.64□□□□□ -2.15
snR54snR54 YOR338WQ99326 363 aa1.64□□□□□ -2.15
snR54snR54 RPS23AP0CX29 145 aaKnown RBP1.63□□□□□ -2.15
snR54snR54 RPS23BP0CX30 145 aa1.63□□□□□ -2.15
snR54snR54 RAD23P32628 398 aaKnown RBP1.63□□□□□ -2.15
snR54snR54 EFM4P40516 257 aa1.63□□□□□ -2.15
snR54snR54 LCB2P40970 561 aa1.63□□□□□ -2.15
snR54snR54 FRE8Q12209 686 aa1.63□□□□□ -2.15
snR54snR54 BEM2P39960 2167 aaKnown RBP1.62□□□□□ -2.15
snR54snR54 RPL1AP0CX43 217 aaKnown RBP1.62□□□□□ -2.15
snR54snR54 RPL1BP0CX44 217 aaKnown RBP1.62□□□□□ -2.15
snR54snR54 BGL2P15703 313 aaKnown RBP1.62□□□□□ -2.15
snR54snR54 TIP20P33891 701 aa1.62□□□□□ -2.15
snR54snR54 YKR015CP36111 568 aa1.62□□□□□ -2.15
snR54snR54 YMR262WP38430 313 aa1.62□□□□□ -2.15
snR54snR54 BUD27P43573 796 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
snR54snR54 EFM3P47163 339 aa1.62□□□□□ -2.15
snR54snR54 SUR7P54003 302 aa1.62□□□□□ -2.15
snR54snR54 TRM82Q03774 444 aa1.62□□□□□ -2.15
snR54snR54 YPR096CO13587 100 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms