RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B VOA1P53262 265 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B KTR6P54070 446 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B STE23Q06010 1027 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B MHR1Q06630 226 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RDL2Q08742 149 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B PFA4Q12006 378 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B REX3Q12090 404 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B WTM1Q12363 437 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B HTZ1Q12692 134 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B CHA1P25379 360 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B ITR1P30605 584 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B MTC4P38335 694 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B YHR218WP38899 603 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RRG9P40156 214 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B ATG18P43601 500 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B UBC13P52490 153 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B SHY1P53266 389 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B NNT1Q05874 261 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B FOL3Q12676 427 aaPredicted RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B YBL111CQ3E7Y5 667 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RPS18AP0CX55 146 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B RPS18BP0CX56 146 aaPredicted RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B UNG1P12887 359 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B DAL2P25335 343 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B CHK1P38147 527 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B SWC5P38326 303 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RCK1P38622 512 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B TIF34P40217 347 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B SGN1P40561 250 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
YOR343W-BYOR343W-B IBA57P47158 497 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RTN1Q04947 295 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B HRI1Q05905 244 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B VAC14Q06708 880 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B DNL4Q08387 944 aaPredicted RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B VPS54Q12071 889 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B DST1P07273 309 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B MSF1P08425 469 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B NFT1P0CE68 1218 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B RPS16AP0CX51 143 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B RPS16BP0CX52 143 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B CCA1P21269 546 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B MIR1P23641 311 aaKnown RBP1.7□□□□□ -2.14
YOR343W-BYOR343W-B AIM29P36154 155 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B BFR1P38934 470 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
YOR343W-BYOR343W-B CIN2P46670 268 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B IPI3P53877 555 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B IZH1Q03419 316 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B SLM3Q12093 417 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B YLR112WQ12130 139 aa1.7□□□□□ -2.14
YOR343W-BYOR343W-B COX2P00410 251 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B RIM1P32445 135 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B COX13P32799 129 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B FRM2P37261 193 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B ECM8P38246 354 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B RCK2P38623 610 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YHR182WP38870 785 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B PRE5P40302 234 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B SEC27P41811 889 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B YFL064CP43540 174 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B AVT4P50944 713 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B ROG1P53118 685 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YNL234WP53857 426 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B SUR7P54003 302 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B ADA2Q02336 434 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B SMP3Q04174 516 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YOR389WQ08912 624 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B APC9Q12107 265 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B CAP2P13517 287 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B OM45P16547 393 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B OSM1P21375 501 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B MNE1P24720 663 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B RPL16AP26784 199 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B VMA5P31412 392 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B ALK2P32789 676 aaPredicted RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B MRP4P32902 394 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B FMP46P36141 133 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B VPS52P39904 641 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B SPO73P40031 143 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B SWC4P53201 476 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YGR067CP53243 804 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B FRE4P53746 719 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YDR387CQ04162 555 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B RPC11Q04307 110 aaPredicted RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B YMR310CQ04867 317 aaPredicted RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B RIF2Q06208 395 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B DXO1Q06349 442 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B TMS1Q12116 473 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YDR018CQ12185 396 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B PRP46Q12417 451 aaPredicted RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B APC2Q12440 853 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B YAL064W-BO13512 126 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B GAL7P08431 366 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B IMA3P0CW40 589 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B IMA4P0CW41 589 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B CTA1P15202 515 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B ZRC1P20107 442 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B AAT2P23542 418 aaKnown RBP1.69□□□□□ -2.14
YOR343W-BYOR343W-B PPH21P23594 369 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B PPH22P23595 377 aa1.69□□□□□ -2.14
YOR343W-BYOR343W-B SUA5P32579 426 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms