RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAT1	YOR048C	FUN26	P31381	517 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	TMA19	P35691	167 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	AXL2	P38928	823 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	PAC10	P48363	199 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	MRX6	P48564	524 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	FOL2	P51601	243 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	PRM1	P53835	661 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	OAZ1	Q02803	292 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	HLR1	Q04429	423 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	RKM5	Q12367	367 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	RDI1	Q12434	202 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	SPS2	P08459	502 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	PET54	P10834	293 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	TRM1	P15565	570 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	NCP1	P16603	691 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	HSP30	P25619	332 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	YKL063C	P35725	167 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	RGA1	P39083	1007 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	PLB1	P39105	664 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	GDS1	P41913	522 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	AAD14	P42884	376 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	BFA1	P47113	574 aa		4.98	□□□□□ -1.61
RAT1	YOR048C	RBG2	P53295	368 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
RAT1	YOR048C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-DR6	P0CX70	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-ER1	P0CX71	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-LR2	P0CX72	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-PL	P0CX73	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-JR1	P0CX74	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-LR3	P0CX75	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-ML2	P0CX76	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	RRP7	P25368	297 aa	Predicted RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	SDS22	P36047	338 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	AUR1	P36107	401 aa	Predicted RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	MRPL36	P36531	177 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YJR111C	P47148	283 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	STE24	P47154	453 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	COS12	P53053	380 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	DOC1	P53068	250 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	SKO1	Q02100	647 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	GPN3	Q06543	272 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YOR378W	Q08902	515 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-GR1	Q12085	440 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	TY1A-OL	Q92392	440 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	PNO1	Q99216	274 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	SNF6	P18888	332 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	CIN1	P40987	1014 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	PFS2	P42841	465 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	MDV1	P47025	714 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YHC3	P47040	408 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	VBA1	Q04301	562 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	OPT2	Q06593	877 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	RRP40	Q08285	240 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	SAC7	P17121	654 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	RDS2	P19541	446 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	MRPL33	P20084	86 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	BAP2	P38084	609 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	BNA4	P38169	460 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	RPS20	P38701	121 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	DBP8	P38719	431 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YPT35	P38815	214 aa	Known RBP	4.97	□□□□□ -1.61
RAT1	YOR048C	CCT6	P39079	546 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	CHA4	P43634	648 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	SNX4	P47057	423 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	RSM7	P47150	247 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YGR042W	P53227	271 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	EAR1	Q03212	550 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	YLR346C	Q06139	101 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	DCS1	Q06151	350 aa		4.97	□□□□□ -1.61
RAT1	YOR048C	MOD5	P07884	428 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RFA2	P26754	273 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	NAM9	P27929	486 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RPC34	P32910	317 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	MTH1	P35198	433 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RPF2	P36160	344 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	MRPL3	P36516	390 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	MNN2	P38069	597 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	SDH8	P38345	138 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	YER184C	P39961	794 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	GPI8	P49018	411 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	SWC4	P53201	476 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	SNO2	P53823	222 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	ARO10	Q06408	635 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	REX4	Q08237	289 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RRP42	Q12277	265 aa	Predicted RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	GCN4	P03069	281 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	DSF1	P0CX08	502 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	YNR073C	P0CX09	502 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	APA1	P16550	321 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	AAC3	P18238	307 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RPA135	P22138	1203 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	ACB1	P31787	87 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	MRP20	P32387	263 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	FLO10	P36170	1169 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	LSM12	P38828	187 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	FMP10	P40098	244 aa		4.96	□□□□□ -1.62
RAT1	YOR048C	RFC4	P40339	323 aa	Known RBP	4.96	□□□□□ -1.62
RAT1	YOR048C	IRC7	P43623	340 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms