RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W LST7P53237 242 aa2.27□□□□□ -2.05
PEP12YOR036W DBP6P53734 629 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W EGD1Q02642 157 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W CAB5Q03941 241 aa2.27□□□□□ -2.05
PEP12YOR036W ECM18Q04623 453 aa2.27□□□□□ -2.05
PEP12YOR036W NAT4Q04751 285 aa2.27□□□□□ -2.05
PEP12YOR036W YLH47Q06493 454 aa2.27□□□□□ -2.05
PEP12YOR036W ALE1Q08548 619 aa2.27□□□□□ -2.05
PEP12YOR036W PCL9Q12477 304 aa2.27□□□□□ -2.05
PEP12YOR036W RRP36Q12481 300 aaPredicted RBP2.27□□□□□ -2.05
PEP12YOR036W DET1Q99288 334 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W RAD1P06777 1100 aa2.26□□□□□ -2.05
PEP12YOR036W MSI1P13712 422 aa2.26□□□□□ -2.05
PEP12YOR036W PUT4P15380 627 aa2.26□□□□□ -2.05
PEP12YOR036W YPS1P32329 569 aa2.26□□□□□ -2.05
PEP12YOR036W PPQ1P32945 549 aa2.26□□□□□ -2.05
PEP12YOR036W PAD1P33751 242 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
PEP12YOR036W YHR182WP38870 785 aa2.26□□□□□ -2.05
PEP12YOR036W END3P39013 349 aa2.26□□□□□ -2.05
PEP12YOR036W PTI1P39927 425 aaPredicted RBP2.26□□□□□ -2.05
PEP12YOR036W RTT105P40063 208 aa2.26□□□□□ -2.05
PEP12YOR036W YGR210CP42942 411 aa2.26□□□□□ -2.05
PEP12YOR036W CTK3P46963 296 aaPredicted RBP2.26□□□□□ -2.05
PEP12YOR036W LOH1P47055 219 aa2.26□□□□□ -2.05
PEP12YOR036W AIM24P47127 394 aa2.26□□□□□ -2.05
PEP12YOR036W NAS6P50086 228 aa2.26□□□□□ -2.05
PEP12YOR036W MST27P53176 234 aa2.26□□□□□ -2.05
PEP12YOR036W ALF1P53904 254 aa2.26□□□□□ -2.05
PEP12YOR036W SPO19Q03029 223 aa2.26□□□□□ -2.05
PEP12YOR036W CSM3Q04659 317 aa2.26□□□□□ -2.05
PEP12YOR036W RTN1Q04947 295 aaKnown RBP2.26□□□□□ -2.05
PEP12YOR036W HRI1Q05905 244 aaKnown RBP2.26□□□□□ -2.05
PEP12YOR036W RRG8Q06109 277 aa2.26□□□□□ -2.05
PEP12YOR036W MRPL35Q06678 367 aa2.26□□□□□ -2.05
PEP12YOR036W VAC14Q06708 880 aa2.26□□□□□ -2.05
PEP12YOR036W YPR091CQ06833 770 aa2.26□□□□□ -2.05
PEP12YOR036W CMS1Q07897 291 aaKnown RBP2.26□□□□□ -2.05
PEP12YOR036W YOR387CQ08910 206 aa2.26□□□□□ -2.05
PEP12YOR036W TMS1Q12116 473 aa2.26□□□□□ -2.05
PEP12YOR036W FCY22Q12119 530 aa2.26□□□□□ -2.05
PEP12YOR036W PFK27Q12471 397 aaPredicted RBP2.26□□□□□ -2.05
PEP12YOR036W YIL002W-AQ3E7Z5 69 aa2.26□□□□□ -2.05
PEP12YOR036W PET123P17558 318 aa2.25□□□□□ -2.05
PEP12YOR036W DAL2P25335 343 aa2.25□□□□□ -2.05
PEP12YOR036W CHA1P25379 360 aaKnown RBP2.25□□□□□ -2.05
PEP12YOR036W DCC1P25559 380 aa2.25□□□□□ -2.05
PEP12YOR036W NAM9P27929 486 aa2.25□□□□□ -2.05
PEP12YOR036W DEG1P31115 442 aaKnown RBP2.25□□□□□ -2.05
PEP12YOR036W RIB7P33312 244 aa2.25□□□□□ -2.05
PEP12YOR036W BUD2P33314 1104 aa2.25□□□□□ -2.05
PEP12YOR036W ANR2P36090 516 aaPredicted RBP2.25□□□□□ -2.05
PEP12YOR036W YKR015CP36111 568 aa2.25□□□□□ -2.05
PEP12YOR036W YPT35P38815 214 aaKnown RBP2.25□□□□□ -2.05
PEP12YOR036W NDT80P38830 627 aa2.25□□□□□ -2.05
PEP12YOR036W RBG1P39729 369 aa2.25□□□□□ -2.05
PEP12YOR036W PAN6P40459 309 aa2.25□□□□□ -2.05
PEP12YOR036W INA22P40576 216 aa2.25□□□□□ -2.05
PEP12YOR036W YCH1P42937 148 aa2.25□□□□□ -2.05
PEP12YOR036W CIN2P46670 268 aa2.25□□□□□ -2.05
PEP12YOR036W GCD14P46959 383 aaPredicted RBP2.25□□□□□ -2.05
PEP12YOR036W VOA1P53262 265 aa2.25□□□□□ -2.05
PEP12YOR036W RIF2Q06208 395 aa2.25□□□□□ -2.05
PEP12YOR036W IRC25Q07951 179 aa2.25□□□□□ -2.05
PEP12YOR036W JID1Q12350 301 aa2.25□□□□□ -2.05
PEP12YOR036W PAA1Q12447 191 aaKnown RBP2.25□□□□□ -2.05
PEP12YOR036W DCP1Q12517 231 aaPredicted RBP2.25□□□□□ -2.05
PEP12YOR036W HTZ1Q12692 134 aaKnown RBP2.25□□□□□ -2.05
PEP12YOR036W RPL18AP0CX49 186 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W RPL18BP0CX50 186 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W NAM2P11325 894 aa2.24□□□□□ -2.05
PEP12YOR036W OM45P16547 393 aa2.24□□□□□ -2.05
PEP12YOR036W SAR1P20606 190 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W RPL16AP26784 199 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W ACB1P31787 87 aa2.24□□□□□ -2.05
PEP12YOR036W MKK1P32490 508 aa2.24□□□□□ -2.05
PEP12YOR036W CSE2P33308 149 aa2.24□□□□□ -2.05
PEP12YOR036W MYO3P36006 1272 aa2.24□□□□□ -2.05
PEP12YOR036W UTP25P40498 721 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W HAC1P41546 238 aa2.24□□□□□ -2.05
PEP12YOR036W AIP1P46680 615 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W TAF6P53040 516 aa2.24□□□□□ -2.05
PEP12YOR036W LSG1P53145 640 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W RPN14P53196 417 aa2.24□□□□□ -2.05
PEP12YOR036W CLD1P53264 445 aa2.24□□□□□ -2.05
PEP12YOR036W SHY1P53266 389 aa2.24□□□□□ -2.05
PEP12YOR036W RVB1Q03940 463 aaKnown RBP2.24□□□□□ -2.05
PEP12YOR036W UBX2Q04228 584 aa2.24□□□□□ -2.05
PEP12YOR036W ERV41Q04651 352 aa2.24□□□□□ -2.05
PEP12YOR036W MFG1Q07684 458 aa2.24□□□□□ -2.05
PEP12YOR036W PLP2Q12017 286 aa2.24□□□□□ -2.05
PEP12YOR036W SLM3Q12093 417 aa2.24□□□□□ -2.05
PEP12YOR036W YDL199CQ12407 687 aa2.24□□□□□ -2.05
PEP12YOR036W APC2Q12440 853 aa2.24□□□□□ -2.05
PEP12YOR036W UBA3Q99344 299 aa2.24□□□□□ -2.05
PEP12YOR036W HEM4P06174 275 aa2.23□□□□□ -2.05
PEP12YOR036W CAR2P07991 424 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W UGA1P17649 471 aa2.23□□□□□ -2.05
PEP12YOR036W VMA5P31412 392 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W YKL162CP36052 402 aa2.23□□□□□ -2.05
PEP12YOR036W ECM8P38246 354 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms