RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	SWP82	P43554	623 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	CHA4	P43634	648 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	SLD3	P53135	668 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	RSM10	Q03201	203 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	MDM30	Q05930	598 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	CRT10	Q08226	957 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	YOS9	Q99220	542 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	FLP1	P03870	423 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	EMP70	P32802	667 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YPT7	P32939	208 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YBR139W	P38109	508 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YLF2	P38746	405 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YEL068C	P39977	110 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YNL195C	P40168	261 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	LSG1	P53145	640 aa	Known RBP	13.26	□□□□□ -0.29
SHR5	YOL110W	TLG1	Q03322	224 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	YMD8	Q03697	442 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	FMP40	Q08968	688 aa	Predicted RBP	13.26	□□□□□ -0.29
SHR5	YOL110W	YPR015C	Q12531	247 aa		13.26	□□□□□ -0.29
SHR5	YOL110W	DAT1	P13483	248 aa	Known RBP	13.25	□□□□□ -0.29
SHR5	YOL110W	URE2	P23202	354 aa	Known RBP	13.25	□□□□□ -0.29
SHR5	YOL110W	CNA1	P23287	553 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	AST2	P39945	430 aa	Known RBP	13.25	□□□□□ -0.29
SHR5	YOL110W	YTA6	P40328	754 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	COS1	P53822	381 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	NOP12	Q08208	459 aa	Known RBP	13.25	□□□□□ -0.29
SHR5	YOL110W	NPC2	Q12408	173 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	APC2	Q12440	853 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	DET1	Q99288	334 aa	Known RBP	13.25	□□□□□ -0.29
SHR5	YOL110W	TEL1	P38110	2787 aa		13.25	□□□□□ -0.29
SHR5	YOL110W	YOL162W	P0CF19	215 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	ARF1	P11076	181 aa	Known RBP	13.24	□□□□□ -0.29
SHR5	YOL110W	SAM35	P14693	329 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	ERD2	P18414	219 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	SNF6	P18888	332 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	CWH43	P25618	953 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	ECM15	P35195	104 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	NSG1	P38837	291 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	PEX18	P38855	283 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	SOP4	P39543	234 aa	Predicted RBP	13.24	□□□□□ -0.29
SHR5	YOL110W	IRC6	P43615	237 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	HMS2	P47175	358 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	YOR376W	Q08900	122 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	PST2	Q12335	198 aa	Known RBP	13.24	□□□□□ -0.29
SHR5	YOL110W	HAA1	Q12753	694 aa	Known RBP	13.24	□□□□□ -0.29
SHR5	YOL110W	MED11	Q99278	115 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	TAD3	Q9URQ3	322 aa		13.24	□□□□□ -0.29
SHR5	YOL110W	CAR2	P07991	424 aa	Known RBP	13.23	□□□□□ -0.29
SHR5	YOL110W	NCP1	P16603	691 aa	Known RBP	13.23	□□□□□ -0.29
SHR5	YOL110W	MRPS28	P21771	286 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	LDB16	P25587	256 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	PUP2	P32379	260 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	MCM7	P38132	845 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	APE4	P38821	490 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	OCA1	P50946	238 aa	Predicted RBP	13.23	□□□□□ -0.29
SHR5	YOL110W	EXG2	P52911	562 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	DFG5	Q05031	458 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	PAL1	Q05518	499 aa	Known RBP	13.23	□□□□□ -0.29
SHR5	YOL110W	SEI1	Q06058	285 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	YLR345W	Q06137	509 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	HSP42	Q12329	375 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	TOR1	P35169	2470 aa		13.23	□□□□□ -0.29
SHR5	YOL110W	YCR100C	P25606	316 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	YME2	P32843	850 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	RPS20	P38701	121 aa	Known RBP	13.22	□□□□□ -0.29
SHR5	YOL110W	ALP1	P38971	573 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	SHE4	P51534	789 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	SEC13	Q04491	297 aa	Known RBP	13.22	□□□□□ -0.29
SHR5	YOL110W	SYO1	Q07395	620 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	UIP4	Q08926	304 aa		13.22	□□□□□ -0.29
SHR5	YOL110W	SNC1	P31109	117 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	LYP1	P32487	611 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	MDL1	P33310	695 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	YJL193W	P39542	402 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	YIL166C	P40445	542 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	RET2	P43621	546 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	ERB1	Q04660	807 aa	Known RBP	13.21	□□□□□ -0.29
SHR5	YOL110W	YLR446W	Q06204	433 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	CYK3	Q07533	885 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	SPC3	Q12133	184 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	DFG16	Q99234	619 aa		13.21	□□□□□ -0.29
SHR5	YOL110W	PRP28	P23394	588 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	ECM4	P36156	370 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	GOS1	P38736	223 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
SHR5	YOL110W	IPT1	P38954	527 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	AVT6	P40074	448 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	IDS2	P46958	469 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	CUZ1	P53899	274 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	GRX5	Q02784	150 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	NUP53	Q03790	475 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	DCR2	Q05924	578 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	TRM10	Q12400	293 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	YDL007C-A	Q2V2Q0	85 aa		13.2	□□□□□ -0.3
SHR5	YOL110W	ADE5,7	P07244	802 aa	Known RBP	13.19	□□□□□ -0.3
SHR5	YOL110W	IDP1	P21954	428 aa	Known RBP	13.19	□□□□□ -0.3
SHR5	YOL110W	OAC1	P32332	324 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	HSP150	P32478	413 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	YKL077W	P36081	392 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	ARN2	P38724	620 aa		13.19	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 93.5 ms