RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W RPL7BQ12213 244 aaKnown RBP8.51□□□□□ -1.05
SMM1YNR015W IPP1P00817 287 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W SNF4P12904 322 aa8.5□□□□□ -1.05
SMM1YNR015W SAC1P32368 623 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W APE2P32454 952 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W CDC3P32457 520 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W HCS1P34243 683 aa8.5□□□□□ -1.05
SMM1YNR015W DHR2P36009 735 aaPredicted RBP8.5□□□□□ -1.05
SMM1YNR015W YHR097CP38809 366 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W AST2P39945 430 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W PKP1P40530 394 aa8.5□□□□□ -1.05
SMM1YNR015W LEM3P42838 414 aa8.5□□□□□ -1.05
SMM1YNR015W CAK1P43568 368 aaPredicted RBP8.5□□□□□ -1.05
SMM1YNR015W ILM1P47155 203 aa8.5□□□□□ -1.05
SMM1YNR015W IMD4P50094 524 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W LSG1P53145 640 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W ASI2P53895 289 aa8.5□□□□□ -1.05
SMM1YNR015W CUZ1P53899 274 aa8.5□□□□□ -1.05
SMM1YNR015W PFA5Q03289 374 aa8.5□□□□□ -1.05
SMM1YNR015W ERB1Q04660 807 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W ARV1Q06541 321 aa8.5□□□□□ -1.05
SMM1YNR015W VPS36Q06696 566 aa8.5□□□□□ -1.05
SMM1YNR015W BRX1Q08235 291 aaKnown RBP8.5□□□□□ -1.05
SMM1YNR015W YOR342CQ12182 319 aa8.5□□□□□ -1.05
SMM1YNR015W NPC2Q12408 173 aa8.5□□□□□ -1.05
SMM1YNR015W PRP8P33334 2413 aaKnown RBP8.49□□□□□ -1.05
SMM1YNR015W YOL163WP0CF20 169 aa8.49□□□□□ -1.05
SMM1YNR015W ERD1P16151 362 aa8.49□□□□□ -1.05
SMM1YNR015W GRE3P38715 327 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
SMM1YNR015W YHR219WP38900 624 aa8.49□□□□□ -1.05
SMM1YNR015W YNL208WP40159 199 aaKnown RBP8.49□□□□□ -1.05
SMM1YNR015W RPE1P46969 238 aa8.49□□□□□ -1.05
SMM1YNR015W MEP3P53390 489 aa8.49□□□□□ -1.05
SMM1YNR015W ATG4P53867 494 aa8.49□□□□□ -1.05
SMM1YNR015W RSN1Q03516 953 aa8.49□□□□□ -1.05
SMM1YNR015W PNS1Q12412 539 aa8.49□□□□□ -1.05
SMM1YNR015W TRA1P38811 3744 aa8.49□□□□□ -1.05
SMM1YNR015W ERG8P24521 451 aa8.48□□□□□ -1.05
SMM1YNR015W TAT2P38967 592 aa8.48□□□□□ -1.05
SMM1YNR015W YEL068CP39977 110 aa8.48□□□□□ -1.05
SMM1YNR015W SOK1P40317 901 aa8.48□□□□□ -1.05
SMM1YNR015W ECO1P43605 281 aa8.48□□□□□ -1.05
SMM1YNR015W PGU1P47180 361 aa8.48□□□□□ -1.05
SMM1YNR015W RHO5P53879 331 aaKnown RBP8.48□□□□□ -1.05
SMM1YNR015W GIS1Q03833 894 aa8.48□□□□□ -1.05
SMM1YNR015W PLM2Q04383 521 aa8.48□□□□□ -1.05
SMM1YNR015W CDA2Q06703 312 aa8.48□□□□□ -1.05
SMM1YNR015W RRG7Q08774 242 aaPredicted RBP8.48□□□□□ -1.05
SMM1YNR015W YPL272CQ08984 517 aa8.48□□□□□ -1.05
SMM1YNR015W YRM1Q12340 786 aa8.48□□□□□ -1.05
SMM1YNR015W RAS1P01119 309 aa8.47□□□□□ -1.05
SMM1YNR015W POL4P25615 582 aa8.47□□□□□ -1.05
SMM1YNR015W HIR2P32480 875 aa8.47□□□□□ -1.05
SMM1YNR015W TDA11P38854 504 aa8.47□□□□□ -1.05
SMM1YNR015W YJL193WP39542 402 aa8.47□□□□□ -1.05
SMM1YNR015W YFR054CP43622 192 aa8.47□□□□□ -1.05
SMM1YNR015W CRT10Q08226 957 aa8.47□□□□□ -1.05
SMM1YNR015W UBC8P28263 218 aa8.46□□□□□ -1.06
SMM1YNR015W ITR2P30606 609 aa8.46□□□□□ -1.06
SMM1YNR015W MRPL6P32904 214 aa8.46□□□□□ -1.06
SMM1YNR015W MDJ1P35191 511 aa8.46□□□□□ -1.06
SMM1YNR015W TPO5P36029 618 aa8.46□□□□□ -1.06
SMM1YNR015W YKR073CP36153 106 aa8.46□□□□□ -1.06
SMM1YNR015W RRP4P38792 359 aaKnown RBP8.46□□□□□ -1.06
SMM1YNR015W PBP1P53297 722 aaKnown RBP8.46□□□□□ -1.06
SMM1YNR015W EKI1Q03764 534 aa8.46□□□□□ -1.06
SMM1YNR015W NOP12Q08208 459 aaKnown RBP8.46□□□□□ -1.06
SMM1YNR015W RSA1Q08932 381 aa8.46□□□□□ -1.06
SMM1YNR015W VIK1Q12045 647 aa8.46□□□□□ -1.06
SMM1YNR015W MCP1Q12106 302 aa8.46□□□□□ -1.06
SMM1YNR015W NFI1Q12216 726 aa8.46□□□□□ -1.06
SMM1YNR015W SIR3P06701 978 aa8.45□□□□□ -1.06
SMM1YNR015W ERD2P18414 219 aa8.45□□□□□ -1.06
SMM1YNR015W RPB10P22139 70 aa8.45□□□□□ -1.06
SMM1YNR015W YCR100CP25606 316 aa8.45□□□□□ -1.06
SMM1YNR015W HBS1P32769 611 aaKnown RBP8.45□□□□□ -1.06
SMM1YNR015W SRO77P38163 1010 aa8.45□□□□□ -1.06
SMM1YNR015W SLM4P38247 162 aa8.45□□□□□ -1.06
SMM1YNR015W RPS26AP39938 119 aaKnown RBP8.45□□□□□ -1.06
SMM1YNR015W RPS26BP39939 119 aaKnown RBP8.45□□□□□ -1.06
SMM1YNR015W YEL057CP39983 233 aa8.45□□□□□ -1.06
SMM1YNR015W SPO73P40031 143 aa8.45□□□□□ -1.06
SMM1YNR015W YJR142WP47173 342 aa8.45□□□□□ -1.06
SMM1YNR015W PRM8P53174 237 aa8.45□□□□□ -1.06
SMM1YNR015W YDR249CQ03787 373 aa8.45□□□□□ -1.06
SMM1YNR015W DTD1Q07648 150 aaKnown RBP8.45□□□□□ -1.06
SMM1YNR015W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
SMM1YNR015W SKI7Q08491 747 aaPredicted RBP8.45□□□□□ -1.06
SMM1YNR015W YLR126CQ12288 251 aa8.45□□□□□ -1.06
SMM1YNR015W DET1Q99288 334 aaKnown RBP8.45□□□□□ -1.06
SMM1YNR015W ATR1P13090 542 aa8.44□□□□□ -1.06
SMM1YNR015W FBA1P14540 359 aaKnown RBP8.44□□□□□ -1.06
SMM1YNR015W RRP7P25368 297 aaPredicted RBP8.44□□□□□ -1.06
SMM1YNR015W ASF2P32448 525 aaPredicted RBP8.44□□□□□ -1.06
SMM1YNR015W ECM15P35195 104 aa8.44□□□□□ -1.06
SMM1YNR015W MTC4P38335 694 aaKnown RBP8.44□□□□□ -1.06
SMM1YNR015W PEX18P38855 283 aa8.44□□□□□ -1.06
SMM1YNR015W ALP1P38971 573 aa8.44□□□□□ -1.06
SMM1YNR015W SNL1P40548 159 aa8.44□□□□□ -1.06
SMM1YNR015W FAR7P43592 221 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms