RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	ADH5	P38113	351 aa	Known RBP	4.29	□□□□□ -1.72
VTA1	YLR181C	AIM24	P47127	394 aa		4.29	□□□□□ -1.72
VTA1	YLR181C	RRN9	P53437	365 aa		4.29	□□□□□ -1.72
VTA1	YLR181C	PAL1	Q05518	499 aa	Known RBP	4.29	□□□□□ -1.72
VTA1	YLR181C	LOT6	Q07923	191 aa		4.29	□□□□□ -1.72
VTA1	YLR181C	SMC5	Q08204	1093 aa		4.29	□□□□□ -1.72
VTA1	YLR181C	YCR024C-B	Q3E7Z8	88 aa		4.29	□□□□□ -1.72
VTA1	YLR181C	RIM15	P43565	1770 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	PIS1	P06197	220 aa	Known RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	RNA1	P11745	407 aa	Known RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	REV1	P12689	985 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	MSI1	P13712	422 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	LAS1	P36146	502 aa	Predicted RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	MRPL10	P36520	322 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	GPX2	P38143	162 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	YHK8	P38776	514 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	MAM33	P40513	266 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	TRM112	P53738	135 aa	Predicted RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	ADA2	Q02336	434 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	TDA1	Q03533	586 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	PRM6	Q04705	352 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	RTN1	Q04947	295 aa	Known RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	RIF2	Q06208	395 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	SMF3	Q12078	473 aa	Predicted RBP	4.28	□□□□□ -1.72
VTA1	YLR181C	RBD2	Q12270	262 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	YRF1-3	P0CX14	1859 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	YRF1-7	P0CX15	1859 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	YRF1-6	P53819	1859 aa		4.28	□□□□□ -1.72
VTA1	YLR181C	SCH9	P11792	824 aa	Known RBP	4.27	□□□□□ -1.73
VTA1	YLR181C	PHO84	P25297	587 aa	Known RBP	4.27	□□□□□ -1.73
VTA1	YLR181C	TOA2	P32774	122 aa		4.27	□□□□□ -1.73
VTA1	YLR181C	YHR131C	P38835	850 aa		4.27	□□□□□ -1.73
VTA1	YLR181C	HAC1	P41546	238 aa		4.27	□□□□□ -1.73
VTA1	YLR181C	ALE1	Q08548	619 aa		4.27	□□□□□ -1.73
VTA1	YLR181C	IZH2	Q12442	317 aa		4.27	□□□□□ -1.73
VTA1	YLR181C	FAA1	P30624	700 aa	Known RBP	4.26	□□□□□ -1.73
VTA1	YLR181C	YBL028C	P38202	106 aa		4.26	□□□□□ -1.73
VTA1	YLR181C	GEP4	P38812	185 aa		4.26	□□□□□ -1.73
VTA1	YLR181C	SDT1	P53078	280 aa		4.26	□□□□□ -1.73
VTA1	YLR181C	MST27	P53176	234 aa		4.26	□□□□□ -1.73
VTA1	YLR181C	JID1	Q12350	301 aa		4.26	□□□□□ -1.73
VTA1	YLR181C	OPI1	P21957	404 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	UBA1	P22515	1024 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	PSO2	P30620	661 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	RAD5	P32849	1169 aa	Predicted RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	TIR2	P33890	251 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	SPT10	P35208	640 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	SDS24	P38314	527 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	AIM10	P39965	576 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	PRE5	P40302	234 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	YFR057W	P43625	151 aa		4.25	□□□□□ -1.73
VTA1	YLR181C	WTM1	Q12363	437 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	HTZ1	Q12692	134 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	UTP10	P42945	1769 aa	Known RBP	4.25	□□□□□ -1.73
VTA1	YLR181C	RPB5	P20434	215 aa		4.24	□□□□□ -1.73
VTA1	YLR181C	OSM1	P21375	501 aa	Known RBP	4.24	□□□□□ -1.73
VTA1	YLR181C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
VTA1	YLR181C	BIR1	P47134	954 aa		4.24	□□□□□ -1.73
VTA1	YLR181C	CSI1	Q04368	295 aa		4.24	□□□□□ -1.73
VTA1	YLR181C	PEX27	Q08580	376 aa		4.24	□□□□□ -1.73
VTA1	YLR181C	LDB16	P25587	256 aa		4.23	□□□□□ -1.73
VTA1	YLR181C	ABM1	P47146	123 aa		4.23	□□□□□ -1.73
VTA1	YLR181C	YNR068C	P53754	272 aa		4.23	□□□□□ -1.73
VTA1	YLR181C	DBP9	Q06218	594 aa	Known RBP	4.23	□□□□□ -1.73
VTA1	YLR181C	TMC1	Q08422	150 aa	Predicted RBP	4.23	□□□□□ -1.73
VTA1	YLR181C	PLP2	Q12017	286 aa		4.23	□□□□□ -1.73
VTA1	YLR181C	ECM8	P38246	354 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	SIF2	P38262	535 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	EGT2	P42835	1041 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	YGR016W	P53209	190 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	UTP6	Q02354	440 aa	Known RBP	4.22	□□□□□ -1.73
VTA1	YLR181C	YMR027W	Q04371	470 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	MHR1	Q06630	226 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	YPR091C	Q06833	770 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	CMS1	Q07897	291 aa	Known RBP	4.22	□□□□□ -1.73
VTA1	YLR181C	PCL9	Q12477	304 aa		4.22	□□□□□ -1.73
VTA1	YLR181C	SWI1	P09547	1314 aa		4.21	□□□□□ -1.73
VTA1	YLR181C	RPS19A	P07280	144 aa	Known RBP	4.21	□□□□□ -1.74
VTA1	YLR181C	RPS19B	P07281	144 aa	Predicted RBP	4.21	□□□□□ -1.74
VTA1	YLR181C	RTC2	P38279	296 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	CAJ1	P39101	391 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	SNL1	P40548	159 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	RPA34	P47006	233 aa	Predicted RBP	4.21	□□□□□ -1.74
VTA1	YLR181C	BNS1	P50084	137 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	SHE10	P53075	577 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	CLD1	P53264	445 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	CRH1	P53301	507 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	FCY22	Q12119	530 aa		4.21	□□□□□ -1.74
VTA1	YLR181C	MEX67	Q99257	599 aa	Known RBP	4.21	□□□□□ -1.74
VTA1	YLR181C	RDS1	P25611	832 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	PRR1	P28708	518 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	MSK1	P32048	576 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	HXT1	P32465	570 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	PTI1	P39927	425 aa	Predicted RBP	4.2	□□□□□ -1.74
VTA1	YLR181C	MIG3	P39943	394 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	UTP18	P40362	594 aa	Predicted RBP	4.2	□□□□□ -1.74
VTA1	YLR181C	LYS12	P40495	371 aa	Known RBP	4.2	□□□□□ -1.74
VTA1	YLR181C	GAB1	P41733	394 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	SEC27	P41811	889 aa	Known RBP	4.2	□□□□□ -1.74
VTA1	YLR181C	MPS2	P53159	387 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms