RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W EFB1P32471 206 aaKnown RBP4.02□□□□□ -1.77
SOF1YLL011W COX13P32799 129 aa4.02□□□□□ -1.77
SOF1YLL011W MRPS5P33759 307 aa4.02□□□□□ -1.77
SOF1YLL011W NRD1P53617 575 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SOF1YLL011W RSN1Q03516 953 aa4.02□□□□□ -1.77
SOF1YLL011W BSP1Q06604 576 aa4.02□□□□□ -1.77
SOF1YLL011W ATG31Q12421 196 aa4.02□□□□□ -1.77
SOF1YLL011W YOR338WQ99326 363 aa4.02□□□□□ -1.77
SOF1YLL011W HEM2P05373 342 aa4.01□□□□□ -1.77
SOF1YLL011W SPO12P17123 173 aa4.01□□□□□ -1.77
SOF1YLL011W PRR1P28708 518 aa4.01□□□□□ -1.77
SOF1YLL011W ITR1P30605 584 aa4.01□□□□□ -1.77
SOF1YLL011W CYM1P32898 989 aa4.01□□□□□ -1.77
SOF1YLL011W COS9P36034 407 aa4.01□□□□□ -1.77
SOF1YLL011W RIM2P38127 377 aa4.01□□□□□ -1.77
SOF1YLL011W PRM9P39551 298 aa4.01□□□□□ -1.77
SOF1YLL011W SEC9P40357 651 aa4.01□□□□□ -1.77
SOF1YLL011W SSN8P47821 323 aa4.01□□□□□ -1.77
SOF1YLL011W NAS6P50086 228 aa4.01□□□□□ -1.77
SOF1YLL011W FRE4P53746 719 aa4.01□□□□□ -1.77
SOF1YLL011W KTR6P54070 446 aa4.01□□□□□ -1.77
SOF1YLL011W HXT11P54862 567 aa4.01□□□□□ -1.77
SOF1YLL011W CTL1Q03220 320 aaKnown RBP4.01□□□□□ -1.77
SOF1YLL011W RVB1Q03940 463 aaKnown RBP4.01□□□□□ -1.77
SOF1YLL011W MYO5Q04439 1219 aaKnown RBP4.01□□□□□ -1.77
SOF1YLL011W YMR034CQ05131 434 aaPredicted RBP4.01□□□□□ -1.77
SOF1YLL011W SKI7Q08491 747 aaPredicted RBP4.01□□□□□ -1.77
SOF1YLL011W SAM4Q08985 325 aaKnown RBP4.01□□□□□ -1.77
SOF1YLL011W YOR029WQ12243 111 aa4.01□□□□□ -1.77
SOF1YLL011W COX2P00410 251 aa4□□□□□ -1.77
SOF1YLL011W RAD3P06839 778 aa4□□□□□ -1.77
SOF1YLL011W RPS24AP0CX31 135 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W RPS24BP0CX32 135 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W FUS3P16892 353 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W UTR1P21373 530 aa4□□□□□ -1.77
SOF1YLL011W YSR3P23501 404 aa4□□□□□ -1.77
SOF1YLL011W VMA5P31412 392 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W TOA2P32774 122 aa4□□□□□ -1.77
SOF1YLL011W MNS1P32906 549 aa4□□□□□ -1.77
SOF1YLL011W PHD1P36093 366 aa4□□□□□ -1.77
SOF1YLL011W OSH3P38713 996 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W EAF6P47128 113 aa4□□□□□ -1.77
SOF1YLL011W KAP114P53067 1004 aa4□□□□□ -1.77
SOF1YLL011W TIM44Q01852 431 aa4□□□□□ -1.77
SOF1YLL011W UBX2Q04228 584 aa4□□□□□ -1.77
SOF1YLL011W CMS1Q07897 291 aaKnown RBP4□□□□□ -1.77
SOF1YLL011W SRL2Q12020 392 aa4□□□□□ -1.77
SOF1YLL011W ADH2P00331 348 aaKnown RBP3.99□□□□□ -1.77
SOF1YLL011W RAD1P06777 1100 aa3.99□□□□□ -1.77
SOF1YLL011W ATP1P07251 545 aaKnown RBP3.99□□□□□ -1.77
SOF1YLL011W MATALPHA1P0CY06 175 aa3.99□□□□□ -1.77
SOF1YLL011W HMLALPHA1P0CY07 175 aa3.99□□□□□ -1.77
SOF1YLL011W LSB5P25369 354 aa3.99□□□□□ -1.77
SOF1YLL011W POP5P28005 173 aa3.99□□□□□ -1.77
SOF1YLL011W SRB4P32569 687 aa3.99□□□□□ -1.77
SOF1YLL011W TMT1P32643 299 aa3.99□□□□□ -1.77
SOF1YLL011W GCG1P32656 232 aaKnown RBP3.99□□□□□ -1.77
SOF1YLL011W VAM7P32912 316 aa3.99□□□□□ -1.77
SOF1YLL011W APD1P38281 316 aa3.99□□□□□ -1.77
SOF1YLL011W HIS2P38635 335 aa3.99□□□□□ -1.77
SOF1YLL011W LEU5P38702 357 aa3.99□□□□□ -1.77
SOF1YLL011W ATG7P38862 630 aa3.99□□□□□ -1.77
SOF1YLL011W FAA2P39518 744 aa3.99□□□□□ -1.77
SOF1YLL011W SHO1P40073 367 aa3.99□□□□□ -1.77
SOF1YLL011W YAR1P46683 200 aa3.99□□□□□ -1.77
SOF1YLL011W MRX5P47007 382 aa3.99□□□□□ -1.77
SOF1YLL011W AIM24P47127 394 aa3.99□□□□□ -1.77
SOF1YLL011W IZH1Q03419 316 aa3.99□□□□□ -1.77
SOF1YLL011W BET5Q03630 159 aa3.99□□□□□ -1.77
SOF1YLL011W MSS11Q03825 758 aa3.99□□□□□ -1.77
SOF1YLL011W YPQ1Q12010 308 aa3.99□□□□□ -1.77
SOF1YLL011W SIA1Q12212 622 aa3.99□□□□□ -1.77
SOF1YLL011W RRI1Q12468 440 aa3.99□□□□□ -1.77
SOF1YLL011W SNF2P22082 1703 aa3.99□□□□□ -1.77
SOF1YLL011W YRF1-3P0CX14 1859 aa3.99□□□□□ -1.77
SOF1YLL011W YRF1-7P0CX15 1859 aa3.99□□□□□ -1.77
SOF1YLL011W YRF1-6P53819 1859 aa3.99□□□□□ -1.77
SOF1YLL011W TDH2P00358 332 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W FRE2P36033 711 aa3.98□□□□□ -1.77
SOF1YLL011W BIG1P38813 335 aa3.98□□□□□ -1.77
SOF1YLL011W YEL020CP39994 560 aa3.98□□□□□ -1.77
SOF1YLL011W SIM1P40472 476 aa3.98□□□□□ -1.77
SOF1YLL011W GAT1P43574 510 aa3.98□□□□□ -1.77
SOF1YLL011W IRC7P43623 340 aa3.98□□□□□ -1.77
SOF1YLL011W TRF5P48561 642 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W TAF6P53040 516 aa3.98□□□□□ -1.77
SOF1YLL011W BIO4P53630 237 aa3.98□□□□□ -1.77
SOF1YLL011W YNL234WP53857 426 aa3.98□□□□□ -1.77
SOF1YLL011W PNG1Q02890 363 aa3.98□□□□□ -1.77
SOF1YLL011W SNZ1Q03148 297 aa3.98□□□□□ -1.77
SOF1YLL011W CAC2Q04199 468 aa3.98□□□□□ -1.77
SOF1YLL011W GMC2Q06201 188 aa3.98□□□□□ -1.77
SOF1YLL011W SGT1Q08446 395 aa3.98□□□□□ -1.77
SOF1YLL011W SLF1Q12034 447 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W YLR419WQ06698 1435 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W JIP3O13555 125 aa3.98□□□□□ -1.77
SOF1YLL011W YAR066WP0CX18 203 aa3.98□□□□□ -1.77
SOF1YLL011W YHR214WP0CX19 203 aa3.98□□□□□ -1.77
SOF1YLL011W YCP4P25349 247 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W SKT5P34226 696 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms