RNA–Protein interactions for RNA: YKR028W

SAP190, Transcript of Protein that forms a complex with the Sit4p protein phosphatase, yeast

Gene SAP190, Length 3,102 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAP190	YKR028W	YOL159C	Q08300	171 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	GRE1	Q08969	168 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YDL211C	Q12121	372 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YDL199C	Q12407	687 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RIB3	Q99258	208 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	SUI3	P09064	285 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	YOL163W	P0CF20	169 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	TFS1	P14306	219 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	FBA1	P14540	359 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	HOP1	P20050	605 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RRP7	P25368	297 aa	Predicted RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	PUP2	P32379	260 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ECM15	P35195	104 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	APT2	P36973	181 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	MTW1	P39731	289 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	SNL1	P40548	159 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ELP2	P42935	788 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	PMT4	P46971	762 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	KEL2	P50090	882 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	IMD4	P50094	524 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	COS6	P53344	381 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	SPR6	Q01684	191 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YPL107W	Q02873	248 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RSC9	Q03124	581 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RIM13	Q03792	727 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ENT2	Q05785	613 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	UTP21	Q06078	939 aa	Predicted RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	GPI11	Q06636	219 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.08	□□□□□ -2.08	not detected
SAP190	YKR028W	FRE7	Q12333	620 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	MRX4	Q12467	430 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ADF1	Q2V2Q1	113 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	HBN1	Q96VH4	193 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ZWF1	P11412	505 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	REC107	P21651	314 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	MKK1	P32490	508 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RPS27A	P35997	82 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	BET3	P36149	193 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RPS27B	P38711	82 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YLF2	P38746	405 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	CHS7	P38843	316 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	MSS4	P38994	779 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ISC1	P40015	477 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	THO1	P40040	218 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	SER3	P40054	469 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	PRE6	P40303	254 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	MPM1	P40364	252 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	NOP9	P47077	666 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	MDE1	P47095	244 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	VMA10	P48836	114 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	RMR1	P53060	241 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	RAI1	P53063	387 aa	Known RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	YGL235W	P53071	178 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YSA1	Q01976	231 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	PEX12	Q04370	399 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ARR1	Q06596	294 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	YPR174C	Q06616	221 aa	Predicted RBP	2.08	□□□□□ -2.08
SAP190	YKR028W	AKR2	Q12013	749 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	VIK1	Q12045	647 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	SNF8	Q12483	233 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	SET6	Q12529	373 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	HFA1	P32874	2273 aa		2.08	□□□□□ -2.08
SAP190	YKR028W	ATR1	P13090	542 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	DPM1	P14020	267 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	MER1	P16523	270 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	CHA1	P25379	360 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	VPS51	P36116	164 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	SSZ1	P38788	538 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.07	□□□□□ -2.08	not detected
SAP190	YKR028W	SEC24	P40482	926 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	AZF1	P41696	914 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	RPL10	P41805	221 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	TWF1	P53250	332 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	HOL1	P53389	586 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	YLR460C	P54007	376 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	TRS23	Q03784	219 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	ASA1	Q06822	443 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	ULA1	Q12059	462 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	ARG81	P05085	880 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	BAR1	P12630	587 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	MCK1	P21965	375 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	PEX3	P28795	441 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	ARP2	P32381	391 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	DPH5	P32469	300 aa	Predicted RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	RPD3	P32561	433 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	NUF2	P33895	451 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	AST1	P35183	429 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	ZTA1	P38230	334 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	MLH1	P38920	769 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	YER184C	P39961	794 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	SPO73	P40031	143 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	IES5	P40060	125 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	PKP1	P40530	394 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	JHD2	P47156	728 aa	Predicted RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	SEH1	P53011	349 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	YGR079W	P53249	370 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	SWP1	Q02795	286 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	NAN1	Q02931	896 aa	Known RBP	2.07	□□□□□ -2.08
SAP190	YKR028W	MDM30	Q05930	598 aa		2.07	□□□□□ -2.08
SAP190	YKR028W	YLR446W	Q06204	433 aa		2.07	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms