RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C PRE7P23724 241 aaKnown RBP11.27□□□□□ -0.6
SDH1YKL148C ARC19P33204 171 aaKnown RBP11.27□□□□□ -0.6
SDH1YKL148C MTC2P34246 357 aa11.27□□□□□ -0.6
SDH1YKL148C PHM8P40025 321 aa11.27□□□□□ -0.6
SDH1YKL148C PLB2Q03674 706 aa11.27□□□□□ -0.6
SDH1YKL148C RRP9Q06506 573 aaKnown RBP11.27□□□□□ -0.6
SDH1YKL148C IPK1Q06667 281 aa11.27□□□□□ -0.6
SDH1YKL148C MRPL35Q06678 367 aa11.27□□□□□ -0.6
SDH1YKL148C YOR114WQ12219 294 aa11.27□□□□□ -0.6
SDH1YKL148C APN1P22936 367 aa11.27□□□□□ -0.61
SDH1YKL148C YCR102CP25608 368 aa11.27□□□□□ -0.61
SDH1YKL148C AHC2P25649 128 aa11.27□□□□□ -0.61
SDH1YKL148C ADE1P27616 306 aa11.27□□□□□ -0.61
SDH1YKL148C TMA19P35691 167 aaKnown RBP11.27□□□□□ -0.61
SDH1YKL148C RTC2P38279 296 aa11.27□□□□□ -0.61
SDH1YKL148C DID2P69771 204 aa11.27□□□□□ -0.61
SDH1YKL148C RPL6AQ02326 176 aaKnown RBP11.27□□□□□ -0.61
SDH1YKL148C EAR1Q03212 550 aa11.27□□□□□ -0.61
SDH1YKL148C ASR1Q06834 288 aa11.27□□□□□ -0.61
SDH1YKL148C SPC3Q12133 184 aa11.27□□□□□ -0.61
SDH1YKL148C YDL007C-AQ2V2Q0 85 aa11.27□□□□□ -0.61
SDH1YKL148C AI4P03878 556 aa11.26□□□□□ -0.61
SDH1YKL148C MOD5P07884 428 aa11.26□□□□□ -0.61
SDH1YKL148C TCD2P36101 447 aaKnown RBP11.26□□□□□ -0.61
SDH1YKL148C MED6P38782 295 aa11.26□□□□□ -0.61
SDH1YKL148C COS10P52924 374 aa11.26□□□□□ -0.61
SDH1YKL148C CDH1P53197 566 aa11.26□□□□□ -0.61
SDH1YKL148C ISU1Q03020 165 aa11.26□□□□□ -0.61
SDH1YKL148C CDA2Q06703 312 aa11.26□□□□□ -0.61
SDH1YKL148C PDH1Q12428 516 aaKnown RBP11.26□□□□□ -0.61
SDH1YKL148C YLR099W-AQ3E798 87 aa11.26□□□□□ -0.61
SDH1YKL148C PEP4P07267 405 aaKnown RBP11.25□□□□□ -0.61
SDH1YKL148C YER137CP40083 148 aaKnown RBP11.25□□□□□ -0.61
SDH1YKL148C MOB1P40484 314 aa11.25□□□□□ -0.61
SDH1YKL148C CIN1P40987 1014 aa11.25□□□□□ -0.61
SDH1YKL148C PLM2Q04383 521 aa11.25□□□□□ -0.61
SDH1YKL148C TPO4Q12256 659 aa11.25□□□□□ -0.61
SDH1YKL148C YOL162WP0CF19 215 aa11.25□□□□□ -0.61
SDH1YKL148C RPS18AP0CX55 146 aaKnown RBP11.25□□□□□ -0.61
SDH1YKL148C RPS18BP0CX56 146 aaPredicted RBP11.25□□□□□ -0.61
SDH1YKL148C SHE2P36068 246 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
SDH1YKL148C TRM7P38238 310 aaKnown RBP11.25□□□□□ -0.61
SDH1YKL148C DED81P38707 554 aaKnown RBP11.25□□□□□ -0.61
SDH1YKL148C CHL4P38907 458 aa11.25□□□□□ -0.61
SDH1YKL148C YIL165CP40446 119 aa11.25□□□□□ -0.61
SDH1YKL148C PAM16P42949 149 aa11.25□□□□□ -0.61
SDH1YKL148C HOS2P53096 452 aaPredicted RBP11.25□□□□□ -0.61
SDH1YKL148C YPL068CQ02749 293 aa11.25□□□□□ -0.61
SDH1YKL148C Q0182Q9ZZW1 134 aa11.25□□□□□ -0.61
SDH1YKL148C VPS13Q07878 3144 aa11.24□□□□□ -0.61
SDH1YKL148C ERD1P16151 362 aa11.24□□□□□ -0.61
SDH1YKL148C OSW5P40219 148 aa11.24□□□□□ -0.61
SDH1YKL148C RPS12P48589 143 aaKnown RBP11.24□□□□□ -0.61
SDH1YKL148C MAL11P53048 616 aa11.24□□□□□ -0.61
SDH1YKL148C YKR011CQ02209 353 aa11.24□□□□□ -0.61
SDH1YKL148C CTL1Q03220 320 aaKnown RBP11.24□□□□□ -0.61
SDH1YKL148C DLT1Q04216 342 aa11.24□□□□□ -0.61
SDH1YKL148C YLR283WQ05867 314 aa11.24□□□□□ -0.61
SDH1YKL148C INH1P01097 85 aa11.23□□□□□ -0.61
SDH1YKL148C ERG1P32476 496 aaKnown RBP11.23□□□□□ -0.61
SDH1YKL148C PUB1P32588 453 aaKnown RBP RIP-Chip data11.23□□□□□ -0.61 RIP-Chip
SDH1YKL148C GID8P40208 455 aa11.23□□□□□ -0.61
SDH1YKL148C PGA1P53896 198 aa11.23□□□□□ -0.61
SDH1YKL148C AQR1P53943 586 aa11.23□□□□□ -0.61
SDH1YKL148C TIR4Q12218 487 aaPredicted RBP11.23□□□□□ -0.61
SDH1YKL148C RPA135P22138 1203 aaKnown RBP11.23□□□□□ -0.61
SDH1YKL148C EXG1P23776 448 aaKnown RBP11.23□□□□□ -0.61
SDH1YKL148C YJU2P28320 278 aaPredicted RBP11.23□□□□□ -0.61
SDH1YKL148C LST4P34239 828 aa11.23□□□□□ -0.61
SDH1YKL148C YKL077WP36081 392 aa11.23□□□□□ -0.61
SDH1YKL148C CCZ1P38273 704 aa11.23□□□□□ -0.61
SDH1YKL148C LEU5P38702 357 aa11.23□□□□□ -0.61
SDH1YKL148C NPY1P53164 384 aa11.23□□□□□ -0.61
SDH1YKL148C NAT4Q04751 285 aa11.23□□□□□ -0.61
SDH1YKL148C MFB1Q04922 465 aa11.23□□□□□ -0.61
SDH1YKL148C ATG41Q12048 136 aa11.23□□□□□ -0.61
SDH1YKL148C YGL041W-AP0C5N3 154 aa11.22□□□□□ -0.61
SDH1YKL148C YCR100CP25606 316 aa11.22□□□□□ -0.61
SDH1YKL148C FUN26P31381 517 aa11.22□□□□□ -0.61
SDH1YKL148C ORC2P32833 620 aa11.22□□□□□ -0.61
SDH1YKL148C YKL151CP36059 337 aa11.22□□□□□ -0.61
SDH1YKL148C MRPL3P36516 390 aa11.22□□□□□ -0.61
SDH1YKL148C NAT2P37293 288 aa11.22□□□□□ -0.61
SDH1YKL148C YHR097CP38809 366 aaKnown RBP11.22□□□□□ -0.61
SDH1YKL148C YEL068CP39977 110 aa11.22□□□□□ -0.61
SDH1YKL148C ART5P53244 586 aaKnown RBP11.22□□□□□ -0.61
SDH1YKL148C YOR214CQ12282 236 aa11.22□□□□□ -0.61
SDH1YKL148C YLR111WQ12528 110 aa11.22□□□□□ -0.61
SDH1YKL148C YGR161W-CQ3E744 92 aa11.22□□□□□ -0.61
SDH1YKL148C URA3P03962 267 aa11.21□□□□□ -0.61
SDH1YKL148C PHO80P20052 293 aa11.21□□□□□ -0.61
SDH1YKL148C FPR1P20081 114 aaKnown RBP11.21□□□□□ -0.61
SDH1YKL148C RAM1P22007 431 aa11.21□□□□□ -0.61
SDH1YKL148C CDC12P32468 407 aaKnown RBP11.21□□□□□ -0.61
SDH1YKL148C SKN1P33336 771 aa11.21□□□□□ -0.61
SDH1YKL148C DOA1P36037 715 aa11.21□□□□□ -0.61
SDH1YKL148C PAU24P38155 120 aa11.21□□□□□ -0.61
SDH1YKL148C RRP4P38792 359 aaKnown RBP11.21□□□□□ -0.61
SDH1YKL148C MSS4P38994 779 aa11.21□□□□□ -0.61
SDH1YKL148C NEO1P40527 1151 aa11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms