RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W SEC65P29478 273 aa4.41□□□□□ -1.7
ABF1YKL112W SSE2P32590 693 aaKnown RBP4.41□□□□□ -1.7
ABF1YKL112W SPC34P36131 295 aa4.41□□□□□ -1.7
ABF1YKL112W YBL029WP38201 376 aa4.41□□□□□ -1.7
ABF1YKL112W MLH1P38920 769 aa4.41□□□□□ -1.7
ABF1YKL112W UBP5P39944 805 aa4.41□□□□□ -1.7
ABF1YKL112W HOC1P47124 396 aa4.41□□□□□ -1.7
ABF1YKL112W GND2P53319 492 aa4.41□□□□□ -1.7
ABF1YKL112W SAE3P89114 91 aa4.41□□□□□ -1.7
ABF1YKL112W DOT1Q04089 582 aaKnown RBP4.41□□□□□ -1.7
ABF1YKL112W AAD15Q08361 143 aa4.41□□□□□ -1.7
ABF1YKL112W YPR071WQ12346 211 aa4.41□□□□□ -1.7
ABF1YKL112W NDJ1Q12366 352 aa4.41□□□□□ -1.7
ABF1YKL112W YOP1Q12402 180 aa4.41□□□□□ -1.7
ABF1YKL112W CSF1Q12150 2958 aa4.4□□□□□ -1.7
ABF1YKL112W THP2O13539 261 aaKnown RBP4.4□□□□□ -1.7
ABF1YKL112W CDC28P00546 298 aaKnown RBP4.4□□□□□ -1.7
ABF1YKL112W PUT2P07275 575 aa4.4□□□□□ -1.7
ABF1YKL112W MOD5P07884 428 aa4.4□□□□□ -1.7
ABF1YKL112W STE18P18852 110 aa4.4□□□□□ -1.7
ABF1YKL112W IME1P21190 360 aa4.4□□□□□ -1.7
ABF1YKL112W RPL24BP24000 155 aaKnown RBP4.4□□□□□ -1.7
ABF1YKL112W MDH3P32419 343 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
ABF1YKL112W TIP20P33891 701 aa4.4□□□□□ -1.7
ABF1YKL112W PTC1P35182 281 aa4.4□□□□□ -1.7
ABF1YKL112W TAF14P35189 244 aa4.4□□□□□ -1.7
ABF1YKL112W SKG1P36169 355 aa4.4□□□□□ -1.7
ABF1YKL112W RIB5P38145 238 aa4.4□□□□□ -1.7
ABF1YKL112W VHC1P38329 1120 aa4.4□□□□□ -1.7
ABF1YKL112W DIA4P38705 446 aaPredicted RBP4.4□□□□□ -1.7
ABF1YKL112W PFS1P38872 237 aa4.4□□□□□ -1.7
ABF1YKL112W SET5P38890 526 aaKnown RBP4.4□□□□□ -1.7
ABF1YKL112W END3P39013 349 aa4.4□□□□□ -1.7
ABF1YKL112W AVT6P40074 448 aa4.4□□□□□ -1.7
ABF1YKL112W RPA34P47006 233 aaPredicted RBP4.4□□□□□ -1.7
ABF1YKL112W BIT61P47041 543 aa4.4□□□□□ -1.7
ABF1YKL112W YJL016WP47072 561 aa4.4□□□□□ -1.7
ABF1YKL112W YNR066CP53752 436 aa4.4□□□□□ -1.7
ABF1YKL112W YMR027WQ04371 470 aa4.4□□□□□ -1.7
ABF1YKL112W YDL086WQ07505 273 aa4.4□□□□□ -1.7
ABF1YKL112W ENT4Q07872 247 aa4.4□□□□□ -1.7
ABF1YKL112W PAM18Q07914 168 aa4.4□□□□□ -1.7
ABF1YKL112W RCL1Q08096 367 aaPredicted RBP4.4□□□□□ -1.7
ABF1YKL112W SLF1Q12034 447 aaKnown RBP4.4□□□□□ -1.7
ABF1YKL112W HTB1P02293 131 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W HTB2P02294 131 aa4.4□□□□□ -1.71
ABF1YKL112W HAP2P06774 265 aa4.4□□□□□ -1.71
ABF1YKL112W GAL3P13045 520 aa4.4□□□□□ -1.71
ABF1YKL112W SAG1P20840 650 aa4.4□□□□□ -1.71
ABF1YKL112W HXT2P23585 541 aa4.4□□□□□ -1.71
ABF1YKL112W MIR1P23641 311 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W MGR1P25573 417 aa4.4□□□□□ -1.71
ABF1YKL112W CYS3P31373 394 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W PMT2P31382 759 aa4.4□□□□□ -1.71
ABF1YKL112W YPK3P38070 525 aa4.4□□□□□ -1.71
ABF1YKL112W YBR062CP38239 180 aa4.4□□□□□ -1.71
ABF1YKL112W IML3P38265 245 aa4.4□□□□□ -1.71
ABF1YKL112W ATG7P38862 630 aa4.4□□□□□ -1.71
ABF1YKL112W CFD1P40558 293 aa4.4□□□□□ -1.71
ABF1YKL112W RGD2P43556 714 aa4.4□□□□□ -1.71
ABF1YKL112W SFH5P47008 294 aa4.4□□□□□ -1.71
ABF1YKL112W RFX1P48743 811 aa4.4□□□□□ -1.71
ABF1YKL112W RSM27P53305 110 aa4.4□□□□□ -1.71
ABF1YKL112W CSN9Q03981 162 aa4.4□□□□□ -1.71
ABF1YKL112W TIF35Q04067 274 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W BUR2Q05949 395 aa4.4□□□□□ -1.71
ABF1YKL112W YLR177WQ06251 628 aa4.4□□□□□ -1.71
ABF1YKL112W FRQ1Q06389 190 aa4.4□□□□□ -1.71
ABF1YKL112W ELG1Q12050 791 aa4.4□□□□□ -1.71
ABF1YKL112W PKH2Q12236 1081 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W WTM1Q12363 437 aaKnown RBP4.4□□□□□ -1.71
ABF1YKL112W MRX4Q12467 430 aa4.4□□□□□ -1.71
ABF1YKL112W PSF1Q12488 208 aa4.4□□□□□ -1.71
ABF1YKL112W ILV5P06168 395 aaKnown RBP4.39□□□□□ -1.71
ABF1YKL112W SPS4P09937 338 aa4.39□□□□□ -1.71
ABF1YKL112W SAR1P20606 190 aaKnown RBP4.39□□□□□ -1.71
ABF1YKL112W CSE2P33308 149 aa4.39□□□□□ -1.71
ABF1YKL112W SIP2P34164 415 aaKnown RBP4.39□□□□□ -1.71
ABF1YKL112W PRX1P34227 261 aaKnown RBP4.39□□□□□ -1.71
ABF1YKL112W ADD66P36040 267 aa4.39□□□□□ -1.71
ABF1YKL112W VID24P38263 362 aa4.39□□□□□ -1.71
ABF1YKL112W POP4P38336 279 aa4.39□□□□□ -1.71
ABF1YKL112W WSC4P38739 605 aa4.39□□□□□ -1.71
ABF1YKL112W UIP3P39547 235 aa4.39□□□□□ -1.71
ABF1YKL112W ERV46P39727 415 aa4.39□□□□□ -1.71
ABF1YKL112W CIN1P40987 1014 aa4.39□□□□□ -1.71
ABF1YKL112W AAD14P42884 376 aa4.39□□□□□ -1.71
ABF1YKL112W MOG1P47123 218 aa4.39□□□□□ -1.71
ABF1YKL112W CWC23P52868 283 aaPredicted RBP4.39□□□□□ -1.71
ABF1YKL112W YGL108CP53139 140 aa4.39□□□□□ -1.71
ABF1YKL112W NMA111P53920 997 aa4.39□□□□□ -1.71
ABF1YKL112W STP1Q00947 519 aa4.39□□□□□ -1.71
ABF1YKL112W DIG1Q03063 452 aaKnown RBP4.39□□□□□ -1.71
ABF1YKL112W ATP25Q03153 612 aa4.39□□□□□ -1.71
ABF1YKL112W APC4Q04601 652 aa4.39□□□□□ -1.71
ABF1YKL112W SSK1Q07084 712 aa4.39□□□□□ -1.71
ABF1YKL112W IWR1Q07532 353 aaPredicted RBP4.39□□□□□ -1.71
ABF1YKL112W ZEO1Q08245 113 aa4.39□□□□□ -1.71
ABF1YKL112W FSH3Q99369 266 aa4.39□□□□□ -1.71
ABF1YKL112W CDC7P06243 507 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 103.3 ms