RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W DCR2Q05924 578 aa2.14□□□□□ -2.07
NUP100YKL068W VPS74Q06385 345 aa2.14□□□□□ -2.07
NUP100YKL068W SHS1Q07657 551 aa2.14□□□□□ -2.07
NUP100YKL068W IRC13Q08630 104 aa2.14□□□□□ -2.07
NUP100YKL068W YOR365CQ08844 703 aa2.14□□□□□ -2.07
NUP100YKL068W MSH5Q12175 901 aa2.14□□□□□ -2.07
NUP100YKL068W NCE102Q12207 173 aaRIP-Chip data2.14□□□□□ -2.07not detected
NUP100YKL068W MES1P00958 751 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W ADE5,7P07244 802 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W RPL27AP0C2H6 136 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W RPL27BP0C2H7 136 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W STE18P18852 110 aa2.13□□□□□ -2.07
NUP100YKL068W CMK2P22517 447 aa2.13□□□□□ -2.07
NUP100YKL068W CNA1P23287 553 aa2.13□□□□□ -2.07
NUP100YKL068W RPL24BP24000 155 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W RRT12P25381 491 aa2.13□□□□□ -2.07
NUP100YKL068W REC114P32841 428 aa2.13□□□□□ -2.07
NUP100YKL068W MTR2P34232 184 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W YKL097CP34245 136 aa2.13□□□□□ -2.07
NUP100YKL068W YPT52P36018 234 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W KAE1P36132 386 aa2.13□□□□□ -2.07
NUP100YKL068W YBR053CP38235 358 aa2.13□□□□□ -2.07
NUP100YKL068W VBA2P38358 474 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W SEC72P39742 193 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W MMF1P40185 145 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W SYG1P40528 902 aa2.13□□□□□ -2.07
NUP100YKL068W POP1P41812 875 aa2.13□□□□□ -2.07
NUP100YKL068W TFG2P41896 400 aaPredicted RBP2.13□□□□□ -2.07
NUP100YKL068W YRB1P41920 201 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W KAP114P53067 1004 aa2.13□□□□□ -2.07
NUP100YKL068W SLX9P53251 210 aaPredicted RBP2.13□□□□□ -2.07
NUP100YKL068W SLI1P53304 468 aa2.13□□□□□ -2.07
NUP100YKL068W YIF1P53845 314 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W YPL068CQ02749 293 aa2.13□□□□□ -2.07
NUP100YKL068W PFA5Q03289 374 aa2.13□□□□□ -2.07
NUP100YKL068W PLM2Q04383 521 aa2.13□□□□□ -2.07
NUP100YKL068W SNT309Q06091 175 aaPredicted RBP2.13□□□□□ -2.07
NUP100YKL068W GMC2Q06201 188 aa2.13□□□□□ -2.07
NUP100YKL068W CDA2Q06703 312 aa2.13□□□□□ -2.07
NUP100YKL068W SDO1Q07953 250 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W YPQ1Q12010 308 aa2.13□□□□□ -2.07
NUP100YKL068W YDL109CQ12103 647 aa2.13□□□□□ -2.07
NUP100YKL068W LSP1Q12230 341 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W DST1P07273 309 aa2.13□□□□□ -2.07
NUP100YKL068W IMA3P0CW40 589 aa2.13□□□□□ -2.07
NUP100YKL068W IMA4P0CW41 589 aa2.13□□□□□ -2.07
NUP100YKL068W MAS2P11914 482 aa2.13□□□□□ -2.07
NUP100YKL068W VPS1P21576 704 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W ERG9P29704 444 aa2.13□□□□□ -2.07
NUP100YKL068W ATP7P30902 174 aa2.13□□□□□ -2.07
NUP100YKL068W COQ2P32378 372 aa2.13□□□□□ -2.07
NUP100YKL068W TMT1P32643 299 aa2.13□□□□□ -2.07
NUP100YKL068W GCG1P32656 232 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W SHP1P34223 423 aa2.13□□□□□ -2.07
NUP100YKL068W MYO3P36006 1272 aa2.13□□□□□ -2.07
NUP100YKL068W RSM22P36056 628 aa2.13□□□□□ -2.07
NUP100YKL068W BNA4P38169 460 aa2.13□□□□□ -2.07
NUP100YKL068W CCT2P39076 527 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W ERG28P40030 148 aa2.13□□□□□ -2.07
NUP100YKL068W YNL194CP40169 301 aa2.13□□□□□ -2.07
NUP100YKL068W COA1P40452 197 aa2.13□□□□□ -2.07
NUP100YKL068W SCD6P45978 349 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
NUP100YKL068W YJL163CP46996 555 aa2.13□□□□□ -2.07
NUP100YKL068W SPT20P50875 604 aa2.13□□□□□ -2.07
NUP100YKL068W RIM8P53179 542 aa2.13□□□□□ -2.07
NUP100YKL068W COG2P53271 262 aa2.13□□□□□ -2.07
NUP100YKL068W YGR151CP53287 111 aa2.13□□□□□ -2.07
NUP100YKL068W BUD32P53323 261 aa2.13□□□□□ -2.07
NUP100YKL068W YTP1P53584 459 aa2.13□□□□□ -2.07
NUP100YKL068W MRPL50P53724 139 aa2.13□□□□□ -2.07
NUP100YKL068W NSG2P53898 299 aa2.13□□□□□ -2.07
NUP100YKL068W VAC7P53950 1165 aa2.13□□□□□ -2.07
NUP100YKL068W IVY1Q04934 453 aa2.13□□□□□ -2.07
NUP100YKL068W YMR226CQ05016 267 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W CDC123Q05791 360 aa2.13□□□□□ -2.07
NUP100YKL068W ATG26Q06321 1198 aa2.13□□□□□ -2.07
NUP100YKL068W YOL075CQ08234 1294 aa2.13□□□□□ -2.07
NUP100YKL068W IMA2Q08295 589 aa2.13□□□□□ -2.07
NUP100YKL068W ABP140Q08641 628 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W SLF1Q12034 447 aaKnown RBP2.13□□□□□ -2.07
NUP100YKL068W CYC7P00045 113 aa2.12□□□□□ -2.07
NUP100YKL068W RPL35AP0CX84 120 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W RPL35BP0CX85 120 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W DPB2P24482 689 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W SLM5P25345 492 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W POP5P28005 173 aa2.12□□□□□ -2.07
NUP100YKL068W ZUO1P32527 433 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W MSN2P33748 704 aa2.12□□□□□ -2.07
NUP100YKL068W AST1P35183 429 aa2.12□□□□□ -2.07
NUP100YKL068W PRS4P38063 326 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W HIS2P38635 335 aa2.12□□□□□ -2.07
NUP100YKL068W EGD2P38879 174 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W MOB1P40484 314 aa2.12□□□□□ -2.07
NUP100YKL068W SLM1P40485 686 aa2.12□□□□□ -2.07
NUP100YKL068W YIL001WP40560 513 aa2.12□□□□□ -2.07
NUP100YKL068W YIR016WP40572 265 aa2.12□□□□□ -2.07
NUP100YKL068W MRX5P47007 382 aa2.12□□□□□ -2.07
NUP100YKL068W UBC11P52492 156 aa2.12□□□□□ -2.07
NUP100YKL068W CWC23P52868 283 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W YGL159WP53110 370 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms