RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W CAC2Q04199 468 aa3.33□□□□□ -1.88
NSP1YJL041W YDL086WQ07505 273 aa3.33□□□□□ -1.88
NSP1YJL041W TRE2Q08693 809 aa3.33□□□□□ -1.88
NSP1YJL041W RGT2Q12300 763 aa3.33□□□□□ -1.88
NSP1YJL041W YPR071WQ12346 211 aa3.33□□□□□ -1.88
NSP1YJL041W SFG1Q12507 346 aa3.33□□□□□ -1.88
NSP1YJL041W YBR298C-AQ8TGK4 73 aa3.33□□□□□ -1.88
NSP1YJL041W PET20Q99373 253 aa3.33□□□□□ -1.88
NSP1YJL041W SCEIP03882 235 aa3.32□□□□□ -1.88
NSP1YJL041W CDC36P06100 191 aaPredicted RBP3.32□□□□□ -1.88
NSP1YJL041W SNF4P12904 322 aa3.32□□□□□ -1.88
NSP1YJL041W URA6P15700 204 aa3.32□□□□□ -1.88
NSP1YJL041W CKA1P15790 372 aa3.32□□□□□ -1.88
NSP1YJL041W PDX1P16451 410 aa3.32□□□□□ -1.88
NSP1YJL041W DAL81P21657 970 aa3.32□□□□□ -1.88
NSP1YJL041W EXG1P23776 448 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W DBR1P24309 405 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W RSA4P25382 515 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W SRO77P38163 1010 aa3.32□□□□□ -1.88
NSP1YJL041W IST2P38250 946 aa3.32□□□□□ -1.88
NSP1YJL041W YHR078WP38799 552 aa3.32□□□□□ -1.88
NSP1YJL041W CRG1P38892 291 aaRIP-Chip data3.32□□□□□ -1.88not detected
NSP1YJL041W YIL161WP40449 235 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W YIL012WP40551 113 aa3.32□□□□□ -1.88
NSP1YJL041W MAD2P40958 196 aa3.32□□□□□ -1.88
NSP1YJL041W MRX5P47007 382 aa3.32□□□□□ -1.88
NSP1YJL041W PRY1P47032 299 aa3.32□□□□□ -1.88
NSP1YJL041W AVT4P50944 713 aa3.32□□□□□ -1.88
NSP1YJL041W ASI2P53895 289 aa3.32□□□□□ -1.88
NSP1YJL041W ELP3Q02908 557 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W RQC1Q05468 723 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W ECM22Q05958 814 aaPredicted RBP3.32□□□□□ -1.88
NSP1YJL041W YPR078CQ06813 372 aa3.32□□□□□ -1.88
NSP1YJL041W HBT1Q07653 1046 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W LCB4Q12246 624 aa3.32□□□□□ -1.88
NSP1YJL041W FAS2P19097 1887 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W ATP1P07251 545 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W TRP4P07285 380 aaPredicted RBP3.32□□□□□ -1.88
NSP1YJL041W MSS18P08593 268 aa3.32□□□□□ -1.88
NSP1YJL041W YPK1P12688 680 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W KAR4P25583 335 aa3.32□□□□□ -1.88
NSP1YJL041W BUB3P26449 341 aa3.32□□□□□ -1.88
NSP1YJL041W ERG1P32476 496 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W ECT1P33412 323 aa3.32□□□□□ -1.88
NSP1YJL041W APN2P38207 520 aa3.32□□□□□ -1.88
NSP1YJL041W BZZ1P38822 633 aa3.32□□□□□ -1.88
NSP1YJL041W CHL4P38907 458 aa3.32□□□□□ -1.88
NSP1YJL041W HEM14P40012 539 aa3.32□□□□□ -1.88
NSP1YJL041W ATF1P40353 525 aa3.32□□□□□ -1.88
NSP1YJL041W YIR035CP40579 254 aa3.32□□□□□ -1.88
NSP1YJL041W DIE2P50076 525 aa3.32□□□□□ -1.88
NSP1YJL041W MRPS35P53292 345 aa3.32□□□□□ -1.88
NSP1YJL041W TRM44Q02648 567 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W CTF19Q02732 369 aa3.32□□□□□ -1.88
NSP1YJL041W YMR209CQ03648 457 aa3.32□□□□□ -1.88
NSP1YJL041W SSL1Q04673 461 aaPredicted RBP3.32□□□□□ -1.88
NSP1YJL041W AIM6Q07716 390 aa3.32□□□□□ -1.88
NSP1YJL041W SDO1Q07953 250 aaKnown RBP3.32□□□□□ -1.88
NSP1YJL041W YOL075CQ08234 1294 aa3.32□□□□□ -1.88
NSP1YJL041W DIA2Q08496 732 aaPredicted RBP3.32□□□□□ -1.88
NSP1YJL041W DAP1Q12091 152 aa3.32□□□□□ -1.88
NSP1YJL041W SNF3P10870 884 aa3.31□□□□□ -1.88
NSP1YJL041W SNF5P18480 905 aa3.31□□□□□ -1.88
NSP1YJL041W IFM1P25038 676 aa3.31□□□□□ -1.88
NSP1YJL041W SUR1P33300 382 aa3.31□□□□□ -1.88
NSP1YJL041W CSG2P35206 410 aa3.31□□□□□ -1.88
NSP1YJL041W YKL162CP36052 402 aa3.31□□□□□ -1.88
NSP1YJL041W RCK1P38622 512 aa3.31□□□□□ -1.88
NSP1YJL041W IPI1P38803 334 aaPredicted RBP3.31□□□□□ -1.88
NSP1YJL041W CIN1P40987 1014 aa3.31□□□□□ -1.88
NSP1YJL041W SNG1P46950 547 aa3.31□□□□□ -1.88
NSP1YJL041W ASG7P46993 209 aa3.31□□□□□ -1.88
NSP1YJL041W SBH2P52871 88 aa3.31□□□□□ -1.88
NSP1YJL041W NBP35P52920 328 aa3.31□□□□□ -1.88
NSP1YJL041W NQM1P53228 333 aaPredicted RBP3.31□□□□□ -1.88
NSP1YJL041W VPS62P53285 467 aa3.31□□□□□ -1.88
NSP1YJL041W BUD17P53727 317 aa3.31□□□□□ -1.88
NSP1YJL041W CPR8P53728 308 aa3.31□□□□□ -1.88
NSP1YJL041W YNR029CP53729 429 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
NSP1YJL041W YML037CQ03703 340 aa3.31□□□□□ -1.88
NSP1YJL041W WHI4Q07655 649 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W MRX4Q12467 430 aa3.31□□□□□ -1.88
NSP1YJL041W LEU2P04173 364 aaPredicted RBP3.31□□□□□ -1.88
NSP1YJL041W SPS4P09937 338 aa3.31□□□□□ -1.88
NSP1YJL041W KIN82P25341 720 aa3.31□□□□□ -1.88
NSP1YJL041W RRT12P25381 491 aa3.31□□□□□ -1.88
NSP1YJL041W AHC2P25649 128 aa3.31□□□□□ -1.88
NSP1YJL041W SPR1P32603 445 aa3.31□□□□□ -1.88
NSP1YJL041W COS9P36034 407 aa3.31□□□□□ -1.88
NSP1YJL041W YCR087C-AP37263 153 aa3.31□□□□□ -1.88
NSP1YJL041W UBS1P38290 277 aa3.31□□□□□ -1.88
NSP1YJL041W LRP1P38801 184 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W GPI16P38875 610 aa3.31□□□□□ -1.88
NSP1YJL041W SET5P38890 526 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W IPT1P38954 527 aa3.31□□□□□ -1.88
NSP1YJL041W RFC4P40339 323 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W NIT1P40447 199 aa3.31□□□□□ -1.88
NSP1YJL041W LYS20P48570 428 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W SEH1P53011 349 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms