RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W YPQ2Q06328 317 aa10.4□□□□□ -0.75
SIM1YIL123W NOP12Q08208 459 aaKnown RBP10.4□□□□□ -0.75
SIM1YIL123W YOR365CQ08844 703 aa10.4□□□□□ -0.75
SIM1YIL123W UIP4Q08926 304 aa10.4□□□□□ -0.75
SIM1YIL123W RCN2Q12044 265 aa10.4□□□□□ -0.75
SIM1YIL123W ACF2Q12168 779 aa10.4□□□□□ -0.75
SIM1YIL123W APC2Q12440 853 aa10.4□□□□□ -0.75
SIM1YIL123W YCR100CP25606 316 aa10.39□□□□□ -0.75
SIM1YIL123W SUR1P33300 382 aa10.39□□□□□ -0.75
SIM1YIL123W BET3P36149 193 aa10.39□□□□□ -0.75
SIM1YIL123W ECM34P38728 170 aa10.39□□□□□ -0.75
SIM1YIL123W AIM10P39965 576 aaKnown RBP10.39□□□□□ -0.75
SIM1YIL123W FCY21P40039 528 aa10.39□□□□□ -0.75
SIM1YIL123W RAI1P53063 387 aaKnown RBP10.39□□□□□ -0.75
SIM1YIL123W OST6Q03723 332 aa10.39□□□□□ -0.75
SIM1YIL123W RAD51P25454 400 aa10.38□□□□□ -0.75
SIM1YIL123W ORC2P32833 620 aa10.38□□□□□ -0.75
SIM1YIL123W SNU114P36048 1008 aaKnown RBP10.38□□□□□ -0.75
SIM1YIL123W VPS51P36116 164 aa10.38□□□□□ -0.75
SIM1YIL123W NVJ1P38881 321 aa10.38□□□□□ -0.75
SIM1YIL123W LTP1P40347 161 aa10.38□□□□□ -0.75
SIM1YIL123W YPS6P40583 537 aa10.38□□□□□ -0.75
SIM1YIL123W IMD3P50095 523 aaKnown RBP10.38□□□□□ -0.75
SIM1YIL123W LSG1P53145 640 aaKnown RBP10.38□□□□□ -0.75
SIM1YIL123W SCW11P53189 542 aa10.38□□□□□ -0.75
SIM1YIL123W TPC1P53257 314 aa10.38□□□□□ -0.75
SIM1YIL123W SEC13Q04491 297 aaKnown RBP10.38□□□□□ -0.75
SIM1YIL123W BNA5Q05979 453 aa10.38□□□□□ -0.75
SIM1YIL123W YLR346CQ06139 101 aa10.38□□□□□ -0.75
SIM1YIL123W ARV1Q06541 321 aa10.38□□□□□ -0.75
SIM1YIL123W SPC3Q12133 184 aa10.38□□□□□ -0.75
SIM1YIL123W CDC31P06704 161 aaKnown RBP10.37□□□□□ -0.75
SIM1YIL123W IMG1P25626 169 aa10.37□□□□□ -0.75
SIM1YIL123W CWP1P28319 239 aa10.37□□□□□ -0.75
SIM1YIL123W YPT7P32939 208 aa10.37□□□□□ -0.75
SIM1YIL123W ARC19P33204 171 aaKnown RBP10.37□□□□□ -0.75
SIM1YIL123W RPS20P38701 121 aaKnown RBP10.37□□□□□ -0.75
SIM1YIL123W ANS1P38832 159 aa10.37□□□□□ -0.75
SIM1YIL123W FMP52P40008 231 aa10.37□□□□□ -0.75
SIM1YIL123W YNL195CP40168 261 aa10.37□□□□□ -0.75
SIM1YIL123W SMK1P41808 388 aa10.37□□□□□ -0.75
SIM1YIL123W YGL101WP53144 215 aa10.37□□□□□ -0.75
SIM1YIL123W MNT4P53745 580 aa10.37□□□□□ -0.75
SIM1YIL123W BRE4Q07660 1125 aa10.37□□□□□ -0.75
SIM1YIL123W YOR238WQ08634 303 aa10.37□□□□□ -0.75
SIM1YIL123W MMP1Q12372 583 aa10.37□□□□□ -0.75
SIM1YIL123W CHL4P38907 458 aa10.36□□□□□ -0.75
SIM1YIL123W IDS2P46958 469 aa10.36□□□□□ -0.75
SIM1YIL123W YAE1P47118 141 aaPredicted RBP10.36□□□□□ -0.75
SIM1YIL123W CWC23P52868 283 aaPredicted RBP10.36□□□□□ -0.75
SIM1YIL123W COS10P52924 374 aa10.36□□□□□ -0.75
SIM1YIL123W URC2Q04411 772 aa10.36□□□□□ -0.75
SIM1YIL123W DIC1Q06143 298 aa10.36□□□□□ -0.75
SIM1YIL123W YLR173WQ06247 608 aa10.36□□□□□ -0.75
SIM1YIL123W PCL9Q12477 304 aa10.36□□□□□ -0.75
SIM1YIL123W YDL007C-AQ2V2Q0 85 aa10.36□□□□□ -0.75
SIM1YIL123W LSO1Q3E827 93 aa10.36□□□□□ -0.75
SIM1YIL123W DET1Q99288 334 aaKnown RBP10.36□□□□□ -0.75
SIM1YIL123W RPL1AP0CX43 217 aaKnown RBP10.35□□□□□ -0.75
SIM1YIL123W RPL1BP0CX44 217 aaKnown RBP10.35□□□□□ -0.75
SIM1YIL123W PET112P33893 541 aa10.35□□□□□ -0.75
SIM1YIL123W YKL077WP36081 392 aa10.35□□□□□ -0.75
SIM1YIL123W YBR238CP38330 731 aaKnown RBP10.35□□□□□ -0.75
SIM1YIL123W PZF1P39933 429 aa10.35□□□□□ -0.75
SIM1YIL123W YJL218WP40892 196 aaKnown RBP10.35□□□□□ -0.75
SIM1YIL123W STB1P42845 420 aa10.35□□□□□ -0.75
SIM1YIL123W ALB1P47019 175 aaPredicted RBP10.35□□□□□ -0.75
SIM1YIL123W MKC7P53379 596 aa10.35□□□□□ -0.75
SIM1YIL123W YPS7Q06325 596 aa10.35□□□□□ -0.75
SIM1YIL123W MLC2Q06580 163 aa10.35□□□□□ -0.75
SIM1YIL123W YPR174CQ06616 221 aaPredicted RBP10.35□□□□□ -0.75
SIM1YIL123W CDA2Q06703 312 aa10.35□□□□□ -0.75
SIM1YIL123W THP3Q12049 470 aaKnown RBP10.35□□□□□ -0.75
SIM1YIL123W GAL4P04386 881 aa10.34□□□□□ -0.75
SIM1YIL123W ERD1P16151 362 aa10.34□□□□□ -0.75
SIM1YIL123W PBN1P25580 416 aa10.34□□□□□ -0.75
SIM1YIL123W SRL3P36167 246 aa10.34□□□□□ -0.75
SIM1YIL123W RTC2P38279 296 aa10.34□□□□□ -0.75
SIM1YIL123W YGL235WP53071 178 aa10.34□□□□□ -0.75
SIM1YIL123W INP1Q03694 420 aa10.34□□□□□ -0.75
SIM1YIL123W YDR514CQ04408 483 aa10.34□□□□□ -0.75
SIM1YIL123W YDL129WQ07555 291 aa10.34□□□□□ -0.75
SIM1YIL123W BRX1Q08235 291 aaKnown RBP10.34□□□□□ -0.75
SIM1YIL123W YOR289WQ12012 251 aaPredicted RBP10.34□□□□□ -0.75
SIM1YIL123W RTK1Q12100 620 aaPredicted RBP10.34□□□□□ -0.75
SIM1YIL123W RAS1P01119 309 aa10.33□□□□□ -0.76
SIM1YIL123W AI1P03875 834 aa10.33□□□□□ -0.76
SIM1YIL123W ADE5,7P07244 802 aaKnown RBP10.33□□□□□ -0.76
SIM1YIL123W PHO80P20052 293 aa10.33□□□□□ -0.76
SIM1YIL123W KAP122P32767 1081 aa10.33□□□□□ -0.76
SIM1YIL123W RPS27AP35997 82 aaKnown RBP10.33□□□□□ -0.76
SIM1YIL123W RPS27BP38711 82 aa10.33□□□□□ -0.76
SIM1YIL123W YIL152WP40455 235 aa10.33□□□□□ -0.76
SIM1YIL123W YIL086CP40503 102 aa10.33□□□□□ -0.76
SIM1YIL123W APS3P47064 194 aa10.33□□□□□ -0.76
SIM1YIL123W SPT20P50875 604 aa10.33□□□□□ -0.76
SIM1YIL123W VPS73P53142 486 aaKnown RBP10.33□□□□□ -0.76
SIM1YIL123W FDC1Q03034 503 aa10.33□□□□□ -0.76
SIM1YIL123W OPT2Q06593 877 aa10.33□□□□□ -0.76
SIM1YIL123W YGR161W-CQ3E744 92 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms