RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W RPL6AQ02326 176 aaKnown RBP7.02□□□□□ -1.29
PEX28YHR150W YPL113CQ02961 396 aa7.02□□□□□ -1.29
PEX28YHR150W MSS11Q03825 758 aa7.02□□□□□ -1.29
PEX28YHR150W ROY1Q04847 553 aa7.02□□□□□ -1.29
PEX28YHR150W BUR2Q05949 395 aa7.02□□□□□ -1.29
PEX28YHR150W EAF1Q06337 982 aa7.02□□□□□ -1.29
PEX28YHR150W SKI7Q08491 747 aaPredicted RBP7.02□□□□□ -1.29
PEX28YHR150W PFA4Q12006 378 aa7.02□□□□□ -1.29
PEX28YHR150W TY1A-NL1Q12391 440 aaKnown RBP7.02□□□□□ -1.29
PEX28YHR150W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
PEX28YHR150W YDR034W-BQ6Q5X2 51 aa7.02□□□□□ -1.29
PEX28YHR150W MDM35O60200 86 aa7.01□□□□□ -1.29
PEX28YHR150W STE7P06784 515 aa7.01□□□□□ -1.29
PEX28YHR150W SFC1P33303 322 aa7.01□□□□□ -1.29
PEX28YHR150W NIC96P34077 839 aa7.01□□□□□ -1.29
PEX28YHR150W MCM7P38132 845 aa7.01□□□□□ -1.29
PEX28YHR150W RTC2P38279 296 aa7.01□□□□□ -1.29
PEX28YHR150W AXL2P38928 823 aa7.01□□□□□ -1.29
PEX28YHR150W ZIM17P42844 174 aa7.01□□□□□ -1.29
PEX28YHR150W SNX4P47057 423 aa7.01□□□□□ -1.29
PEX28YHR150W RAD17P48581 401 aa7.01□□□□□ -1.29
PEX28YHR150W RPS12P48589 143 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W NUP57P48837 541 aa7.01□□□□□ -1.29
PEX28YHR150W OST6Q03723 332 aa7.01□□□□□ -1.29
PEX28YHR150W YDR444WQ04093 687 aa7.01□□□□□ -1.29
PEX28YHR150W RRP40Q08285 240 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W YOR283WQ12040 230 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W DAP1Q12091 152 aa7.01□□□□□ -1.29
PEX28YHR150W ATG31Q12421 196 aa7.01□□□□□ -1.29
PEX28YHR150W YOR019WQ99248 730 aa7.01□□□□□ -1.29
PEX28YHR150W RPS18AP0CX55 146 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W RPS18BP0CX56 146 aaPredicted RBP7.01□□□□□ -1.29
PEX28YHR150W PET54P10834 293 aa7.01□□□□□ -1.29
PEX28YHR150W NCP1P16603 691 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W ADE1P27616 306 aa7.01□□□□□ -1.29
PEX28YHR150W NTH1P32356 751 aa7.01□□□□□ -1.29
PEX28YHR150W SUR1P33300 382 aa7.01□□□□□ -1.29
PEX28YHR150W PTC2P39966 464 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W PHM8P40025 321 aa7.01□□□□□ -1.29
PEX28YHR150W YJL068CP40363 299 aa7.01□□□□□ -1.29
PEX28YHR150W MNT3P40549 630 aa7.01□□□□□ -1.29
PEX28YHR150W AAD14P42884 376 aa7.01□□□□□ -1.29
PEX28YHR150W FAA4P47912 694 aaKnown RBP7.01□□□□□ -1.29
PEX28YHR150W DID2P69771 204 aa7.01□□□□□ -1.29
PEX28YHR150W NUP116Q02630 1113 aa7.01□□□□□ -1.29
PEX28YHR150W TDA1Q03533 586 aa7.01□□□□□ -1.29
PEX28YHR150W PLB2Q03674 706 aa7.01□□□□□ -1.29
PEX28YHR150W BOP2Q06150 570 aa7.01□□□□□ -1.29
PEX28YHR150W CDA2Q06703 312 aa7.01□□□□□ -1.29
PEX28YHR150W PCL9Q12477 304 aa7.01□□□□□ -1.29
PEX28YHR150W YLR111WQ12528 110 aa7.01□□□□□ -1.29
PEX28YHR150W LSO1Q3E827 93 aa7.01□□□□□ -1.29
PEX28YHR150W SPS2P08459 502 aa7□□□□□ -1.29
PEX28YHR150W SCL1P21243 252 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W AGP1P25376 633 aa7□□□□□ -1.29
PEX28YHR150W YCR102CP25608 368 aa7□□□□□ -1.29
PEX28YHR150W YJU2P28320 278 aaPredicted RBP7□□□□□ -1.29
PEX28YHR150W TCD2P36101 447 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W RPS20P38701 121 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W PET100P38958 111 aa7□□□□□ -1.29
PEX28YHR150W PLB1P39105 664 aa7□□□□□ -1.29
PEX28YHR150W YER137CP40083 148 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W TIF34P40217 347 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W YIL165CP40446 119 aa7□□□□□ -1.29
PEX28YHR150W LSB3P43603 459 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W CDH1P53197 566 aa7□□□□□ -1.29
PEX28YHR150W MNT4P53745 580 aa7□□□□□ -1.29
PEX28YHR150W AIM36Q03798 255 aa7□□□□□ -1.29
PEX28YHR150W DLT1Q04216 342 aa7□□□□□ -1.29
PEX28YHR150W TPO3Q06451 622 aa7□□□□□ -1.29
PEX28YHR150W SPC3Q12133 184 aa7□□□□□ -1.29
PEX28YHR150W TIR4Q12218 487 aaPredicted RBP7□□□□□ -1.29
PEX28YHR150W RKM5Q12367 367 aa7□□□□□ -1.29
PEX28YHR150W SFG1Q12507 346 aa7□□□□□ -1.29
PEX28YHR150W YPR015CQ12531 247 aa7□□□□□ -1.29
PEX28YHR150W YDL007C-AQ2V2Q0 85 aa7□□□□□ -1.29
PEX28YHR150W YLR099W-AQ3E798 87 aa7□□□□□ -1.29
PEX28YHR150W MTR10Q99189 972 aa7□□□□□ -1.29
PEX28YHR150W PNO1Q99216 274 aaKnown RBP7□□□□□ -1.29
PEX28YHR150W YOL163WP0CF20 169 aa6.99□□□□□ -1.29
PEX28YHR150W ERD1P16151 362 aa6.99□□□□□ -1.29
PEX28YHR150W TMA19P35691 167 aaKnown RBP6.99□□□□□ -1.29
PEX28YHR150W YKL077WP36081 392 aa6.99□□□□□ -1.29
PEX28YHR150W LEU5P38702 357 aa6.99□□□□□ -1.29
PEX28YHR150W SER3P40054 469 aa6.99□□□□□ -1.29
PEX28YHR150W UBC9P50623 157 aaPredicted RBP6.99□□□□□ -1.29
PEX28YHR150W SPT20P50875 604 aa6.99□□□□□ -1.29
PEX28YHR150W ART5P53244 586 aaKnown RBP6.99□□□□□ -1.29
PEX28YHR150W RHO4Q00246 291 aa6.99□□□□□ -1.29
PEX28YHR150W MRPS16Q02608 121 aa6.99□□□□□ -1.29
PEX28YHR150W YMR310CQ04867 317 aaPredicted RBP6.99□□□□□ -1.29
PEX28YHR150W MFB1Q04922 465 aa6.99□□□□□ -1.29
PEX28YHR150W RSF1Q05043 376 aa6.99□□□□□ -1.29
PEX28YHR150W MRPL35Q06678 367 aa6.99□□□□□ -1.29
PEX28YHR150W YDL176WQ12027 708 aa6.99□□□□□ -1.29
PEX28YHR150W YOL114CQ12322 202 aa6.99□□□□□ -1.29
PEX28YHR150W RRP12Q12754 1228 aaKnown RBP6.99□□□□□ -1.29
PEX28YHR150W CCH1P50077 2039 aa6.99□□□□□ -1.29
PEX28YHR150W PEP4P07267 405 aaKnown RBP6.98□□□□□ -1.29
PEX28YHR150W MOD5P07884 428 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms