RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID30	YGL227W	BNA6	P43619	295 aa		4.64	□□□□□ -1.67
VID30	YGL227W	SLD3	P53135	668 aa		4.64	□□□□□ -1.67
VID30	YGL227W	STE23	Q06010	1027 aa		4.64	□□□□□ -1.67
VID30	YGL227W	BRX1	Q08235	291 aa	Known RBP	4.64	□□□□□ -1.67
VID30	YGL227W	RRP40	Q08285	240 aa	Known RBP	4.64	□□□□□ -1.67
VID30	YGL227W	FDH1	Q08911	376 aa		4.64	□□□□□ -1.67
VID30	YGL227W	ATP2	P00830	511 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	RPS31	P05759	152 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	GCD1	P09032	578 aa	Predicted RBP	4.63	□□□□□ -1.67
VID30	YGL227W	PHO81	P17442	1178 aa		4.63	□□□□□ -1.67
VID30	YGL227W	FAR1	P21268	830 aa		4.63	□□□□□ -1.67
VID30	YGL227W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VID30	YGL227W	TSL1	P38427	1098 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	GDI1	P39958	451 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	SCS2	P40075	244 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	DDI1	P40087	428 aa		4.63	□□□□□ -1.67
VID30	YGL227W	COG3	P40094	801 aa		4.63	□□□□□ -1.67
VID30	YGL227W	ROG1	P53118	685 aa		4.63	□□□□□ -1.67
VID30	YGL227W	COG2	P53271	262 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RPL6A	Q02326	176 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	RSM28	Q03430	361 aa		4.63	□□□□□ -1.67
VID30	YGL227W	GPB1	Q08886	897 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RUP1	Q12242	671 aa		4.63	□□□□□ -1.67
VID30	YGL227W	BMT6	Q12291	365 aa		4.63	□□□□□ -1.67
VID30	YGL227W	ADE8	P04161	214 aa		4.63	□□□□□ -1.67
VID30	YGL227W	SUA7	P29055	345 aa	Predicted RBP	4.63	□□□□□ -1.67
VID30	YGL227W	FUN30	P31380	1131 aa		4.63	□□□□□ -1.67
VID30	YGL227W	CHK1	P38147	527 aa		4.63	□□□□□ -1.67
VID30	YGL227W	CIN1	P40987	1014 aa		4.63	□□□□□ -1.67
VID30	YGL227W	URB2	P47108	1174 aa		4.63	□□□□□ -1.67
VID30	YGL227W	ATG4	P53867	494 aa		4.63	□□□□□ -1.67
VID30	YGL227W	IGO1	P53897	168 aa		4.63	□□□□□ -1.67
VID30	YGL227W	CIK1	Q01649	594 aa		4.63	□□□□□ -1.67
VID30	YGL227W	YPL068C	Q02749	293 aa		4.63	□□□□□ -1.67
VID30	YGL227W	ATP25	Q03153	612 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RSN1	Q03516	953 aa		4.63	□□□□□ -1.67
VID30	YGL227W	SEC10	Q06245	871 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RKM1	Q08961	583 aa	Predicted RBP	4.63	□□□□□ -1.67
VID30	YGL227W	MHF1	Q3E835	90 aa		4.63	□□□□□ -1.67
VID30	YGL227W	SEN1	Q00416	2231 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	YHR214C-D	P0CX93	97 aa		4.63	□□□□□ -1.67
VID30	YGL227W	CNA1	P23287	553 aa		4.63	□□□□□ -1.67
VID30	YGL227W	GCD11	P32481	527 aa	Known RBP	4.63	□□□□□ -1.67
VID30	YGL227W	YEF1	P32622	495 aa		4.63	□□□□□ -1.67
VID30	YGL227W	YHL044W	P38727	235 aa		4.63	□□□□□ -1.67
VID30	YGL227W	MTW1	P39731	289 aa		4.63	□□□□□ -1.67
VID30	YGL227W	NMD5	P46970	1048 aa		4.63	□□□□□ -1.67
VID30	YGL227W	SBH2	P52871	88 aa		4.63	□□□□□ -1.67
VID30	YGL227W	YPL039W	Q03080	316 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RIM13	Q03792	727 aa		4.63	□□□□□ -1.67
VID30	YGL227W	YDR391C	Q04170	232 aa		4.63	□□□□□ -1.67
VID30	YGL227W	MCP1	Q12106	302 aa		4.63	□□□□□ -1.67
VID30	YGL227W	RBD2	Q12270	262 aa		4.63	□□□□□ -1.67
VID30	YGL227W	CDC8	P00572	216 aa		4.62	□□□□□ -1.67
VID30	YGL227W	VPS51	P36116	164 aa		4.62	□□□□□ -1.67
VID30	YGL227W	INM1	P38710	295 aa		4.62	□□□□□ -1.67
VID30	YGL227W	ARN1	P38731	627 aa		4.62	□□□□□ -1.67
VID30	YGL227W	ZRG8	P40021	1076 aa		4.62	□□□□□ -1.67
VID30	YGL227W	CAB2	P40506	365 aa		4.62	□□□□□ -1.67
VID30	YGL227W	CDC40	P40968	455 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	SNM1	P40993	198 aa		4.62	□□□□□ -1.67
VID30	YGL227W	MRPL13	Q02204	264 aa		4.62	□□□□□ -1.67
VID30	YGL227W	SSC1	P0CS90	654 aa	Known RBP	4.62	□□□□□ -1.67
VID30	YGL227W	GCD2	P12754	651 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	BUD5	P25300	642 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	SLC1	P33333	303 aa		4.62	□□□□□ -1.67
VID30	YGL227W	PRY2	P36110	329 aa		4.62	□□□□□ -1.67
VID30	YGL227W	BNA4	P38169	460 aa		4.62	□□□□□ -1.67
VID30	YGL227W	SPP381	P38282	291 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	PRS3	P38689	320 aa	Known RBP	4.62	□□□□□ -1.67
VID30	YGL227W	MNN9	P39107	395 aa	Known RBP	4.62	□□□□□ -1.67
VID30	YGL227W	MUP1	P50276	574 aa		4.62	□□□□□ -1.67
VID30	YGL227W	YGL235W	P53071	178 aa		4.62	□□□□□ -1.67
VID30	YGL227W	LSG1	P53145	640 aa	Known RBP	4.62	□□□□□ -1.67
VID30	YGL227W	NOP19	P53317	196 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	SKI8	Q02793	397 aa	Predicted RBP	4.62	□□□□□ -1.67
VID30	YGL227W	DIG1	Q03063	452 aa	Known RBP	4.62	□□□□□ -1.67
VID30	YGL227W	GOT1	Q03554	138 aa		4.62	□□□□□ -1.67
VID30	YGL227W	TOM1	Q03280	3268 aa		4.61	□□□□□ -1.67
VID30	YGL227W	RIM2	P38127	377 aa		4.61	□□□□□ -1.67
VID30	YGL227W	ALP1	P38971	573 aa		4.61	□□□□□ -1.67
VID30	YGL227W	ATF1	P40353	525 aa		4.61	□□□□□ -1.67
VID30	YGL227W	LYS12	P40495	371 aa	Known RBP	4.61	□□□□□ -1.67
VID30	YGL227W	HAM1	P47119	197 aa	Known RBP	4.61	□□□□□ -1.67
VID30	YGL227W	APT1	P49435	187 aa	Known RBP	4.61	□□□□□ -1.67
VID30	YGL227W	YNL046W	P53956	172 aa		4.61	□□□□□ -1.67
VID30	YGL227W	SRL4	Q03085	281 aa		4.61	□□□□□ -1.67
VID30	YGL227W	NUP53	Q03790	475 aa		4.61	□□□□□ -1.67
VID30	YGL227W	IPK1	Q06667	281 aa		4.61	□□□□□ -1.67
VID30	YGL227W	GEP3	Q08622	556 aa		4.61	□□□□□ -1.67
VID30	YGL227W	UBX3	Q12229	455 aa		4.61	□□□□□ -1.67
VID30	YGL227W	YBR056W-A	I2HB52	66 aa		4.61	□□□□□ -1.67
VID30	YGL227W	REP1	P03871	373 aa		4.61	□□□□□ -1.67
VID30	YGL227W	RPP1B	P10622	106 aa	Known RBP	4.61	□□□□□ -1.67
VID30	YGL227W	UGA1	P17649	471 aa		4.61	□□□□□ -1.67
VID30	YGL227W	HIR2	P32480	875 aa		4.61	□□□□□ -1.67
VID30	YGL227W	LIN1	P38852	340 aa	Predicted RBP	4.61	□□□□□ -1.67
VID30	YGL227W	TED1	P40533	473 aa		4.61	□□□□□ -1.67
VID30	YGL227W	MET28	P40573	187 aa		4.61	□□□□□ -1.67
VID30	YGL227W	NCE101	Q02820	53 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms