RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W ISA1Q07821 250 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W RRP40Q08285 240 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W BDS1Q08347 646 aa2.27□□□□□ -2.05
SPF1YEL031W YOL114CQ12322 202 aa2.27□□□□□ -2.05
SPF1YEL031W RRI1Q12468 440 aa2.27□□□□□ -2.05
SPF1YEL031W HBN1Q96VH4 193 aa2.27□□□□□ -2.05
SPF1YEL031W ISN1Q99312 450 aa2.27□□□□□ -2.05
SPF1YEL031W COX3P00420 269 aa2.27□□□□□ -2.05
SPF1YEL031W PMA1P05030 918 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W NAM2P11325 894 aa2.27□□□□□ -2.05
SPF1YEL031W CLB6P32943 380 aa2.27□□□□□ -2.05
SPF1YEL031W SPT10P35208 640 aa2.27□□□□□ -2.05
SPF1YEL031W ADD66P36040 267 aa2.27□□□□□ -2.05
SPF1YEL031W PHO88P38264 188 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W BSD2P38356 321 aa2.27□□□□□ -2.05
SPF1YEL031W SAP30P38429 201 aa2.27□□□□□ -2.05
SPF1YEL031W SOH1P38633 127 aa2.27□□□□□ -2.05
SPF1YEL031W MSC7P38694 644 aa2.27□□□□□ -2.05
SPF1YEL031W PTC7P38797 343 aa2.27□□□□□ -2.05
SPF1YEL031W PNT1P38969 423 aa2.27□□□□□ -2.05
SPF1YEL031W ASP1P38986 381 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W RPL13BP40212 199 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W YIL108WP40483 696 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W IST3P40565 148 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W FET4P40988 552 aa2.27□□□□□ -2.05
SPF1YEL031W GLC8P41818 229 aa2.27□□□□□ -2.05
SPF1YEL031W PRM10P42946 383 aa2.27□□□□□ -2.05
SPF1YEL031W YFL012WP43580 148 aa2.27□□□□□ -2.05
SPF1YEL031W ACF4P47129 309 aa2.27□□□□□ -2.05
SPF1YEL031W MCM22P47167 239 aa2.27□□□□□ -2.05
SPF1YEL031W RRT6P53117 311 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W NSA1P53136 463 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W TUB4P53378 473 aa2.27□□□□□ -2.05
SPF1YEL031W OCA2P53949 197 aa2.27□□□□□ -2.05
SPF1YEL031W GAS3Q03655 524 aa2.27□□□□□ -2.05
SPF1YEL031W DUS4Q06063 367 aa2.27□□□□□ -2.05
SPF1YEL031W YLR040CQ07988 224 aa2.27□□□□□ -2.05
SPF1YEL031W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SPF1YEL031W ENV7Q12003 364 aa2.27□□□□□ -2.05
SPF1YEL031W LYS21Q12122 440 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W PCL9Q12477 304 aa2.27□□□□□ -2.05
SPF1YEL031W RPL13AQ12690 199 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W HIS1P00498 297 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W ADE8P04161 214 aa2.27□□□□□ -2.05
SPF1YEL031W HXK2P04807 486 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W FUR4P05316 633 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W RPL31AP0C2H8 113 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W RPL31BP0C2H9 113 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W HSP26P15992 214 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SPF1YEL031W PDA1P16387 420 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W APA1P16550 321 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W AAC3P18238 307 aa2.27□□□□□ -2.05
SPF1YEL031W PRE7P23724 241 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W RER1P25560 188 aa2.27□□□□□ -2.05
SPF1YEL031W YCR061WP25639 631 aa2.27□□□□□ -2.05
SPF1YEL031W MRP17P28778 131 aa2.27□□□□□ -2.05
SPF1YEL031W ALY1P36117 915 aa2.27□□□□□ -2.05
SPF1YEL031W AIM29P36154 155 aa2.27□□□□□ -2.05
SPF1YEL031W TCM62P38228 572 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W SLZ1P40167 298 aa2.27□□□□□ -2.05
SPF1YEL031W YIR035CP40579 254 aa2.27□□□□□ -2.05
SPF1YEL031W PHO23P50947 330 aa2.27□□□□□ -2.05
SPF1YEL031W SLX9P53251 210 aaPredicted RBP2.27□□□□□ -2.05
SPF1YEL031W KTR6P54070 446 aa2.27□□□□□ -2.05
SPF1YEL031W ODC1Q03028 310 aa2.27□□□□□ -2.05
SPF1YEL031W VBA4Q04602 768 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W VID22Q05934 901 aa2.27□□□□□ -2.05
SPF1YEL031W GIC2Q06648 383 aa2.27□□□□□ -2.05
SPF1YEL031W MED7Q08278 222 aa2.27□□□□□ -2.05
SPF1YEL031W YPR027CQ12079 277 aa2.27□□□□□ -2.05
SPF1YEL031W RKM5Q12367 367 aa2.27□□□□□ -2.05
SPF1YEL031W RDI1Q12434 202 aa2.27□□□□□ -2.05
SPF1YEL031W YCL012CQ8J0M4 134 aa2.27□□□□□ -2.05
SPF1YEL031W MEX67Q99257 599 aaKnown RBP2.27□□□□□ -2.05
SPF1YEL031W LEU4P06208 619 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W ATP5P09457 212 aa2.26□□□□□ -2.05
SPF1YEL031W HAP4P14064 554 aa2.26□□□□□ -2.05
SPF1YEL031W CKS1P20486 150 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W ATP11P32453 318 aa2.26□□□□□ -2.05
SPF1YEL031W SCM4P32564 187 aa2.26□□□□□ -2.05
SPF1YEL031W YKU70P32807 602 aa2.26□□□□□ -2.05
SPF1YEL031W VID24P38263 362 aa2.26□□□□□ -2.05
SPF1YEL031W YPC1P38298 316 aa2.26□□□□□ -2.05
SPF1YEL031W TRS20P38334 175 aa2.26□□□□□ -2.05
SPF1YEL031W GDI1P39958 451 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W YEL028WP39989 153 aa2.26□□□□□ -2.05
SPF1YEL031W FMP52P40008 231 aa2.26□□□□□ -2.05
SPF1YEL031W SNG1P46950 547 aa2.26□□□□□ -2.05
SPF1YEL031W STE24P47154 453 aa2.26□□□□□ -2.05
SPF1YEL031W MRX6P48564 524 aa2.26□□□□□ -2.05
SPF1YEL031W SDT1P53078 280 aa2.26□□□□□ -2.05
SPF1YEL031W SCW11P53189 542 aa2.26□□□□□ -2.05
SPF1YEL031W TIM21P53220 239 aa2.26□□□□□ -2.05
SPF1YEL031W BUD9P53226 547 aa2.26□□□□□ -2.05
SPF1YEL031W IGO1P53897 168 aa2.26□□□□□ -2.05
SPF1YEL031W NSG2P53898 299 aa2.26□□□□□ -2.05
SPF1YEL031W MTD1Q02046 320 aaKnown RBP2.26□□□□□ -2.05
SPF1YEL031W EAR1Q03212 550 aa2.26□□□□□ -2.05
SPF1YEL031W TRS31Q03337 283 aa2.26□□□□□ -2.05
SPF1YEL031W ARG7Q04728 441 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms