RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX5YDR330W YPR202WQ08993 238 aa3.63□□□□□ -1.83
UBX5YDR330W YDR061WQ12298 539 aa3.63□□□□□ -1.83
UBX5YDR330W YLR422WQ06409 1932 aa3.62□□□□□ -1.83
UBX5YDR330W CAR1P00812 333 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W SCEIP03882 235 aa3.62□□□□□ -1.83
UBX5YDR330W RPL24AP04449 155 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W ATP1P07251 545 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W GLK1P17709 500 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W RPS2P25443 254 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W GEX1P25596 615 aa3.62□□□□□ -1.83
UBX5YDR330W SPR1P32603 445 aa3.62□□□□□ -1.83
UBX5YDR330W ASC1P38011 319 aaKnown RBP3.62□□□□□ -1.83
UBX5YDR330W MRP21P38175 177 aa3.62□□□□□ -1.83
UBX5YDR330W RTS2P40962 232 aa3.62□□□□□ -1.83
UBX5YDR330W DSL1P53847 754 aa3.62□□□□□ -1.83
UBX5YDR330W CDC14Q00684 551 aa3.62□□□□□ -1.83
UBX5YDR330W ATX2Q12067 313 aa3.62□□□□□ -1.83
UBX5YDR330W OCA6Q12454 224 aa3.62□□□□□ -1.83
UBX5YDR330W TFB5Q3E7C1 72 aaPredicted RBP3.62□□□□□ -1.83
UBX5YDR330W GCD2P12754 651 aaPredicted RBP3.61□□□□□ -1.83
UBX5YDR330W YCR007CP25354 239 aa3.61□□□□□ -1.83
UBX5YDR330W ASK1P35734 292 aa3.61□□□□□ -1.83
UBX5YDR330W YNK1P36010 153 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W RFS1P38234 210 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W URA8P38627 578 aaPredicted RBP3.61□□□□□ -1.83
UBX5YDR330W RRP3P38712 501 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W BZZ1P38822 633 aa3.61□□□□□ -1.83
UBX5YDR330W YHB1P39676 399 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W PSA1P41940 361 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W YJR011CP47086 261 aaPredicted RBP3.61□□□□□ -1.83
UBX5YDR330W TRF5P48561 642 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W NUP84P52891 726 aa3.61□□□□□ -1.83
UBX5YDR330W TIM13P53299 105 aa3.61□□□□□ -1.83
UBX5YDR330W COS6P53344 381 aa3.61□□□□□ -1.83
UBX5YDR330W YDR476CQ03362 224 aa3.61□□□□□ -1.83
UBX5YDR330W MSS11Q03825 758 aa3.61□□□□□ -1.83
UBX5YDR330W CSN9Q03981 162 aa3.61□□□□□ -1.83
UBX5YDR330W RPN9Q04062 393 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W HPT1Q04178 221 aaKnown RBP3.61□□□□□ -1.83
UBX5YDR330W YET2Q04210 160 aa3.61□□□□□ -1.83
UBX5YDR330W BCP1Q06338 283 aa3.61□□□□□ -1.83
UBX5YDR330W YNL162W-AQ3E7A8 72 aa3.61□□□□□ -1.83
UBX5YDR330W STE2D6VTK4 431 aa3.6□□□□□ -1.83
UBX5YDR330W SEC63P14906 663 aa3.6□□□□□ -1.83
UBX5YDR330W HNM1P19807 563 aa3.6□□□□□ -1.83
UBX5YDR330W AAT2P23542 418 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W VPS17P32913 551 aa3.6□□□□□ -1.83
UBX5YDR330W MRPL4P36517 319 aa3.6□□□□□ -1.83
UBX5YDR330W ECM13P38195 257 aa3.6□□□□□ -1.83
UBX5YDR330W RRN10P38204 145 aa3.6□□□□□ -1.83
UBX5YDR330W FAU1P40099 211 aa3.6□□□□□ -1.83
UBX5YDR330W MAM33P40513 266 aa3.6□□□□□ -1.83
UBX5YDR330W DIM1P41819 318 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W YFL040WP43562 540 aa3.6□□□□□ -1.83
UBX5YDR330W AIF1P52923 378 aa3.6□□□□□ -1.83
UBX5YDR330W TRM112P53738 135 aaPredicted RBP3.6□□□□□ -1.83
UBX5YDR330W CUS2P53830 285 aaPredicted RBP3.6□□□□□ -1.83
UBX5YDR330W SLM2P53955 656 aa3.6□□□□□ -1.83
UBX5YDR330W SAM50P53969 484 aa3.6□□□□□ -1.83
UBX5YDR330W PRO2P54885 456 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W PIR3Q03180 325 aa3.6□□□□□ -1.83
UBX5YDR330W HER2Q03557 464 aa3.6□□□□□ -1.83
UBX5YDR330W COQ11Q05892 277 aa3.6□□□□□ -1.83
UBX5YDR330W MDM30Q05930 598 aa3.6□□□□□ -1.83
UBX5YDR330W FAR10Q06001 478 aa3.6□□□□□ -1.83
UBX5YDR330W SEC10Q06245 871 aa3.6□□□□□ -1.83
UBX5YDR330W LDB18Q07887 179 aa3.6□□□□□ -1.83
UBX5YDR330W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
UBX5YDR330W RMD5Q12508 421 aa3.6□□□□□ -1.83
UBX5YDR330W YPL247CQ12523 523 aa3.6□□□□□ -1.83
UBX5YDR330W MAS1P10507 462 aa3.6□□□□□ -1.83
UBX5YDR330W NMT1P14743 455 aa3.6□□□□□ -1.83
UBX5YDR330W ARO3P14843 370 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W NSP1P14907 823 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W RPI1P23250 407 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W MGR1P25573 417 aa3.6□□□□□ -1.83
UBX5YDR330W YCR090CP25654 182 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W APE2P32454 952 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W AEP1P32493 518 aa3.6□□□□□ -1.83
UBX5YDR330W KAR9P32526 644 aa3.6□□□□□ -1.83
UBX5YDR330W AST1P35183 429 aa3.6□□□□□ -1.83
UBX5YDR330W SPC34P36131 295 aa3.6□□□□□ -1.83
UBX5YDR330W ADH5P38113 351 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W GND1P38720 489 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W MLH1P38920 769 aa3.6□□□□□ -1.83
UBX5YDR330W HAT2P39984 401 aa3.6□□□□□ -1.83
UBX5YDR330W PCL6P40038 420 aa3.6□□□□□ -1.83
UBX5YDR330W SAS2P40963 338 aa3.6□□□□□ -1.83
UBX5YDR330W GAT1P43574 510 aa3.6□□□□□ -1.83
UBX5YDR330W BUD13P46947 266 aaPredicted RBP3.6□□□□□ -1.83
UBX5YDR330W FMP33P46998 180 aa3.6□□□□□ -1.83
UBX5YDR330W YIF1P53845 314 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W LSM3P57743 89 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W RIM13Q03792 727 aa3.6□□□□□ -1.83
UBX5YDR330W YDR387CQ04162 555 aa3.6□□□□□ -1.83
UBX5YDR330W MRPL1Q04599 285 aa3.6□□□□□ -1.83
UBX5YDR330W DBP9Q06218 594 aaKnown RBP3.6□□□□□ -1.83
UBX5YDR330W YFH1Q07540 174 aa3.6□□□□□ -1.83
UBX5YDR330W YLR012CQ07927 99 aa3.6□□□□□ -1.83
UBX5YDR330W UBX3Q12229 455 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms