RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	COX15	P40086	486 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	UFE1	P41834	346 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	COS4	P43542	379 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	PTR3	P43606	678 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	PHO23	P50947	330 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	VPS73	P53142	486 aa	Known RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	NQM1	P53228	333 aa	Predicted RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	YGR168C	P53293	376 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	EMI2	Q04409	500 aa	Known RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	YPL150W	Q12152	901 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	ARP6	Q12509	438 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	RPP2A	P05319	106 aa	Known RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	ATP10	P18496	279 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RPB8	P20436	146 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RAD57	P25301	460 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	CAM1	P29547	415 aa	Known RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	ACH1	P32316	526 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	STE14	P32584	239 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	IES6	P32617	166 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RGT1	P32862	1170 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	DRE2	P36152	348 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	HAT2	P39984	401 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	LCP5	P40079	357 aa	Predicted RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	QRI1	P43123	477 aa	Known RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	ATG27	P46989	271 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	YJR141W	P47172	347 aa	Predicted RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	YGL235W	P53071	178 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	MTL1	P53214	551 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	GND2	P53319	492 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	YLR460C	P54007	376 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	YLR224W	Q05947	369 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RFU1	Q08003	200 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	DIA2	Q08496	732 aa	Predicted RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	TMS1	Q12116	473 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RUP1	Q12242	671 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	SET6	Q12529	373 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RPO41	P13433	1351 aa	Known RBP	5.47	□□□□□ -1.53
CHL4	YDR254W	SSN2	P38931	1420 aa		5.47	□□□□□ -1.53
CHL4	YDR254W	RPA190	P10964	1664 aa	Known RBP	5.46	□□□□□ -1.53
CHL4	YDR254W	SCEI	P03882	235 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	RPP0	P05317	312 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	PPR1	P07272	904 aa	Predicted RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	SGV1	P23293	657 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	YSP3	P25036	478 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	GAC1	P28006	793 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	CLG1	P35190	452 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	AAP1	P37898	856 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	RRN10	P38204	145 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	VBA2	P38358	474 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	IKI1	P38874	309 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	ELO1	P39540	310 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	YMR134W	P40207	237 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	GAT2	P40209	560 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	SFH5	P47008	294 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	YJR111C	P47148	283 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	CCC1	P47818	322 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	YPT32	P51996	222 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	CWC25	P53854	179 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	ASI1	P54074	624 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	OST6	Q03723	332 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	YMR087W	Q04299	284 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	CSM3	Q04659	317 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	MDM30	Q05930	598 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	BER1	Q06688	274 aa	Known RBP	5.46	□□□□□ -1.54
CHL4	YDR254W	YPL199C	Q08954	240 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	SFM1	Q12314	213 aa		5.46	□□□□□ -1.54
CHL4	YDR254W	ATP6	P00854	259 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ASP3-2	P0CX77	362 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ASP3-3	P0CX78	362 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ASP3-4	P0CX79	362 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ASP3-1	P0CZ17	362 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	TRR1	P29509	319 aa	Known RBP	5.45	□□□□□ -1.54
CHL4	YDR254W	ITR2	P30606	609 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	INM1	P38710	295 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ECM1	P39715	212 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	SLM1	P40485	686 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	URM1	P40554	99 aa	Predicted RBP	5.45	□□□□□ -1.54
CHL4	YDR254W	YIR016W	P40572	265 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	YFR057W	P43625	151 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	PHO86	P46956	311 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	YJR054W	P47114	497 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	HOC1	P47124	396 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	NAS6	P50086	228 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	BIO4	P53630	237 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	BUD17	P53727	317 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	ASI2	P53895	289 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	SLU7	Q02775	382 aa	Known RBP	5.45	□□□□□ -1.54
CHL4	YDR254W	NRG1	Q03125	231 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	DYN3	Q04949	312 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	BCH1	Q05029	724 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	RIF2	Q06208	395 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	SAM4	Q08985	325 aa	Known RBP	5.45	□□□□□ -1.54
CHL4	YDR254W	YER175W-A	Q8TGU4	54 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	FSH3	Q99369	266 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	CDC25	P04821	1589 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	DNF1	P32660	1571 aa		5.45	□□□□□ -1.54
CHL4	YDR254W	CHO2	P05374	869 aa	Known RBP	5.44	□□□□□ -1.54
CHL4	YDR254W	NHP6A	P11632	93 aa	Known RBP	5.44	□□□□□ -1.54
CHL4	YDR254W	AAT2	P23542	418 aa	Known RBP	5.44	□□□□□ -1.54
CHL4	YDR254W	POP5	P28005	173 aa		5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms