RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeastyeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APM3YBR288C YIR035CP40579 254 aa2.48□□□□□ -2.01
APM3YBR288C CTK3P46963 296 aaPredicted RBP2.48□□□□□ -2.01
APM3YBR288C ASN2P49090 572 aaKnown RBP2.48□□□□□ -2.01
APM3YBR288C RMI1Q02685 241 aa2.48□□□□□ -2.01
APM3YBR288C DDC1Q08949 612 aa2.48□□□□□ -2.01
APM3YBR288C HIF1Q12373 385 aa2.48□□□□□ -2.01
APM3YBR288C PEP1P32319 1579 aa2.48□□□□□ -2.01
APM3YBR288C HEM4P06174 275 aa2.47□□□□□ -2.01
APM3YBR288C UNG1P12887 359 aa2.47□□□□□ -2.01
APM3YBR288C DBF4P32325 704 aa2.47□□□□□ -2.01
APM3YBR288C RRT13P40042 185 aa2.47□□□□□ -2.01
APM3YBR288C MRX11Q03079 207 aa2.47□□□□□ -2.01
APM3YBR288C ZIP1P31111 875 aa2.46□□□□□ -2.02
APM3YBR288C RTT102P53330 157 aa2.46□□□□□ -2.02
APM3YBR288C SPC19Q03954 165 aa2.46□□□□□ -2.02
APM3YBR288C GAT3Q07928 141 aa2.46□□□□□ -2.02
APM3YBR288C YDL109CQ12103 647 aa2.46□□□□□ -2.02
APM3YBR288C APC2Q12440 853 aa2.46□□□□□ -2.02
APM3YBR288C AUS1Q08409 1394 aa2.46□□□□□ -2.02
APM3YBR288C RNA1P11745 407 aaKnown RBP2.45□□□□□ -2.02
APM3YBR288C RPL16AP26784 199 aaKnown RBP2.45□□□□□ -2.02
APM3YBR288C LTV1P34078 463 aa2.45□□□□□ -2.02
APM3YBR288C COS9P36034 407 aa2.45□□□□□ -2.02
APM3YBR288C CDH1P53197 566 aa2.45□□□□□ -2.02
APM3YBR288C YGR015CP53208 328 aa2.45□□□□□ -2.02
APM3YBR288C BPT1P14772 1559 aa2.45□□□□□ -2.02
APM3YBR288C SHE3P38272 425 aaKnown RBP2.45□□□□□ -2.02
APM3YBR288C TRR2P38816 342 aa2.45□□□□□ -2.02
APM3YBR288C RPN14P53196 417 aa2.45□□□□□ -2.02
APM3YBR288C MEH1Q02205 184 aa2.45□□□□□ -2.02
APM3YBR288C MRX8Q05473 314 aa2.45□□□□□ -2.02
APM3YBR288C GPM3Q12326 303 aa2.45□□□□□ -2.02
APM3YBR288C FUS3P16892 353 aaKnown RBP2.44□□□□□ -2.02
APM3YBR288C SPS19P32573 292 aaKnown RBP2.44□□□□□ -2.02
APM3YBR288C AST1P35183 429 aa2.44□□□□□ -2.02
APM3YBR288C DBP7P36120 742 aaKnown RBP2.44□□□□□ -2.02
APM3YBR288C SHE1P38200 338 aa2.44□□□□□ -2.02
APM3YBR288C STB1P42845 420 aa2.44□□□□□ -2.02
APM3YBR288C YJR054WP47114 497 aa2.44□□□□□ -2.02
APM3YBR288C CWC22P53333 577 aaKnown RBP2.44□□□□□ -2.02
APM3YBR288C YDR541CQ03049 344 aa2.44□□□□□ -2.02
APM3YBR288C NDL1Q06568 189 aa2.44□□□□□ -2.02
APM3YBR288C AAD15Q08361 143 aa2.44□□□□□ -2.02
APM3YBR288C YAL067W-AQ8TGK6 75 aa2.44□□□□□ -2.02
APM3YBR288C HIR3P47171 1648 aa2.43□□□□□ -2.02
APM3YBR288C RPL23AP0CX41 137 aaKnown RBP2.43□□□□□ -2.02
APM3YBR288C RPL23BP0CX42 137 aaKnown RBP2.43□□□□□ -2.02
APM3YBR288C PTK1P36002 662 aaPredicted RBP2.43□□□□□ -2.02
APM3YBR288C NOP6Q07623 225 aaKnown RBP2.43□□□□□ -2.02
APM3YBR288C MYO2P19524 1574 aaKnown RBP2.43□□□□□ -2.02
APM3YBR288C FRM2P37261 193 aa2.42□□□□□ -2.02
APM3YBR288C MNL1P38888 796 aa2.42□□□□□ -2.02
APM3YBR288C ZRG17P53735 605 aa2.42□□□□□ -2.02
APM3YBR288C SLT2Q00772 484 aa2.42□□□□□ -2.02
APM3YBR288C GAS2Q06135 555 aa2.42□□□□□ -2.02
APM3YBR288C YCF1P39109 1515 aaKnown RBP2.41□□□□□ -2.02
APM3YBR288C LTE1P07866 1435 aa2.41□□□□□ -2.02
APM3YBR288C MPE1P35728 441 aaKnown RBP2.41□□□□□ -2.02
APM3YBR288C SPO73P40031 143 aa2.41□□□□□ -2.02
APM3YBR288C MET5P47169 1442 aa2.41□□□□□ -2.02
APM3YBR288C BNI1P41832 1953 aa2.41□□□□□ -2.02
APM3YBR288C MIR1P23641 311 aaKnown RBP2.4□□□□□ -2.02
APM3YBR288C RRP7P25368 297 aaPredicted RBP2.4□□□□□ -2.02
APM3YBR288C PMT2P31382 759 aa2.4□□□□□ -2.02
APM3YBR288C KAP104P38217 918 aaKnown RBP2.4□□□□□ -2.02
APM3YBR288C SPP381P38282 291 aaPredicted RBP2.4□□□□□ -2.02
APM3YBR288C YHR177WP38867 453 aa2.4□□□□□ -2.02
APM3YBR288C AIM23P47015 356 aa2.4□□□□□ -2.02
APM3YBR288C INP2Q03824 705 aa2.4□□□□□ -2.02
APM3YBR288C YLH47Q06493 454 aa2.4□□□□□ -2.02
APM3YBR288C FLO11P08640 1367 aa2.4□□□□□ -2.03
APM3YBR288C RPS14AP06367 137 aaKnown RBP2.39□□□□□ -2.03
APM3YBR288C RPS14BP39516 138 aaKnown RBP2.39□□□□□ -2.03
APM3YBR288C YOL029CQ08187 201 aa2.39□□□□□ -2.03
APM3YBR288C ATG2P53855 1592 aa2.39□□□□□ -2.03
APM3YBR288C STE2D6VTK4 431 aa2.39□□□□□ -2.03
APM3YBR288C MRPL8P22353 238 aa2.39□□□□□ -2.03
APM3YBR288C SKG6P32900 734 aaPredicted RBP2.39□□□□□ -2.03
APM3YBR288C SED5Q01590 340 aa2.39□□□□□ -2.03
APM3YBR288C API2Q04413 109 aa2.39□□□□□ -2.03
APM3YBR288C HRT1Q08273 121 aa2.39□□□□□ -2.03
APM3YBR288C DNF1P32660 1571 aa2.38□□□□□ -2.03
APM3YBR288C SSK2P53599 1579 aa2.38□□□□□ -2.03
APM3YBR288C IRC20Q06554 1556 aa2.38□□□□□ -2.03
APM3YBR288C CBF5P33322 483 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
APM3YBR288C SRB2P34162 210 aa2.38□□□□□ -2.03
APM3YBR288C FAR10Q06001 478 aa2.38□□□□□ -2.03
APM3YBR288C IPK1Q06667 281 aa2.38□□□□□ -2.03
APM3YBR288C CDC25P04821 1589 aa2.37□□□□□ -2.03
APM3YBR288C RPA190P10964 1664 aaKnown RBP2.37□□□□□ -2.03
APM3YBR288C GGC1P38988 300 aa2.37□□□□□ -2.03
APM3YBR288C YIL059CP40520 121 aa2.37□□□□□ -2.03
APM3YBR288C COS4P43542 379 aa2.37□□□□□ -2.03
APM3YBR288C BUD27P43573 796 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
APM3YBR288C GYL1Q04322 720 aa2.37□□□□□ -2.03
APM3YBR288C SHS1Q07657 551 aa2.37□□□□□ -2.03
APM3YBR288C SPE3Q12074 293 aaKnown RBP2.37□□□□□ -2.03
APM3YBR288C YOR338WQ99326 363 aa2.37□□□□□ -2.03
APM3YBR288C CKA2P19454 339 aa2.36□□□□□ -2.03
APM3YBR288C SSE1P32589 693 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms