RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MKK2P32491 506 aa6.18□□□□□ -1.42
SWD1YAR003W RPN2P32565 945 aaKnown RBP6.18□□□□□ -1.42
SWD1YAR003W LHS1P36016 881 aa6.18□□□□□ -1.42
SWD1YAR003W YHR210CP38893 341 aa6.18□□□□□ -1.42
SWD1YAR003W RCY1P39531 840 aa6.18□□□□□ -1.42
SWD1YAR003W YRB2P40517 327 aa6.18□□□□□ -1.42
SWD1YAR003W MPH1P40562 993 aa6.18□□□□□ -1.42
SWD1YAR003W SPG5P42933 373 aa6.18□□□□□ -1.42
SWD1YAR003W CAK1P43568 368 aaPredicted RBP6.18□□□□□ -1.42
SWD1YAR003W BNA3P47039 444 aaKnown RBP6.18□□□□□ -1.42
SWD1YAR003W JHD2P47156 728 aaPredicted RBP6.18□□□□□ -1.42
SWD1YAR003W PMT3P47190 753 aa6.18□□□□□ -1.42
SWD1YAR003W NUP57P48837 541 aa6.18□□□□□ -1.42
SWD1YAR003W PRM8P53174 237 aa6.18□□□□□ -1.42
SWD1YAR003W MTQ1P53944 314 aa6.18□□□□□ -1.42
SWD1YAR003W TPS1Q00764 495 aaKnown RBP6.18□□□□□ -1.42
SWD1YAR003W REX3Q12090 404 aa6.18□□□□□ -1.42
SWD1YAR003W DBP10Q12389 995 aaKnown RBP6.18□□□□□ -1.42
SWD1YAR003W MHF1Q3E835 90 aa6.18□□□□□ -1.42
SWD1YAR003W RIB3Q99258 208 aa6.18□□□□□ -1.42
SWD1YAR003W RHO1P06780 209 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W YSF3P0C074 85 aaPredicted RBP6.17□□□□□ -1.42
SWD1YAR003W RPL40AP0CH08 128 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W RPL40BP0CH09 128 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W MCK1P21965 375 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W BUD5P25300 642 aaPredicted RBP6.17□□□□□ -1.42
SWD1YAR003W RRP7P25368 297 aaPredicted RBP6.17□□□□□ -1.42
SWD1YAR003W PTP2P29461 750 aa6.17□□□□□ -1.42
SWD1YAR003W SAC1P32368 623 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W PTR2P32901 601 aa6.17□□□□□ -1.42
SWD1YAR003W UBS1P38290 277 aa6.17□□□□□ -1.42
SWD1YAR003W SSZ1P38788 538 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W TDA11P38854 504 aa6.17□□□□□ -1.42
SWD1YAR003W SPO73P40031 143 aa6.17□□□□□ -1.42
SWD1YAR003W SWP1Q02795 286 aa6.17□□□□□ -1.42
SWD1YAR003W URC2Q04411 772 aa6.17□□□□□ -1.42
SWD1YAR003W ATG17Q06410 417 aa6.17□□□□□ -1.42
SWD1YAR003W VPS36Q06696 566 aa6.17□□□□□ -1.42
SWD1YAR003W REH1Q06709 432 aa6.17□□□□□ -1.42
SWD1YAR003W PSF1Q12488 208 aa6.17□□□□□ -1.42
SWD1YAR003W RPS21BQ3E754 87 aaKnown RBP6.17□□□□□ -1.42
SWD1YAR003W GLK1P17709 500 aaKnown RBP6.16□□□□□ -1.42
SWD1YAR003W STE4P18851 423 aa6.16□□□□□ -1.42
SWD1YAR003W GPI12P23797 304 aa6.16□□□□□ -1.42
SWD1YAR003W IDH1P28834 360 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SWD1YAR003W PMT2P31382 759 aa6.16□□□□□ -1.42
SWD1YAR003W VPH2P32341 215 aa6.16□□□□□ -1.42
SWD1YAR003W CYS4P32582 507 aaKnown RBP6.16□□□□□ -1.42
SWD1YAR003W SEA4P38164 1038 aa6.16□□□□□ -1.42
SWD1YAR003W LEU5P38702 357 aa6.16□□□□□ -1.42
SWD1YAR003W MBP1P39678 833 aa6.16□□□□□ -1.42
SWD1YAR003W COG3P40094 801 aa6.16□□□□□ -1.42
SWD1YAR003W YIL152WP40455 235 aa6.16□□□□□ -1.42
SWD1YAR003W IRC24P40580 263 aa6.16□□□□□ -1.42
SWD1YAR003W MSS2P40990 351 aa6.16□□□□□ -1.42
SWD1YAR003W TPC1P53257 314 aa6.16□□□□□ -1.42
SWD1YAR003W DAM1P53267 343 aa6.16□□□□□ -1.42
SWD1YAR003W PXR1P53335 271 aaPredicted RBP6.16□□□□□ -1.42
SWD1YAR003W DBP6P53734 629 aaKnown RBP6.16□□□□□ -1.42
SWD1YAR003W TMA20P89886 181 aaPredicted RBP6.16□□□□□ -1.42
SWD1YAR003W NBA1Q08229 501 aaKnown RBP6.16□□□□□ -1.42
SWD1YAR003W YOL163WP0CF20 169 aa6.15□□□□□ -1.42
SWD1YAR003W YCK1P23291 538 aa6.15□□□□□ -1.42
SWD1YAR003W PBN1P25580 416 aa6.15□□□□□ -1.42
SWD1YAR003W FAA1P30624 700 aaKnown RBP6.15□□□□□ -1.42
SWD1YAR003W GSH1P32477 678 aa6.15□□□□□ -1.42
SWD1YAR003W PRP21P32524 280 aaPredicted RBP6.15□□□□□ -1.42
SWD1YAR003W TIF3P34167 436 aaKnown RBP6.15□□□□□ -1.42
SWD1YAR003W YBR138CP38277 524 aa6.15□□□□□ -1.42
SWD1YAR003W CTF8P38877 133 aa6.15□□□□□ -1.42
SWD1YAR003W UTP25P40498 721 aaKnown RBP6.15□□□□□ -1.42
SWD1YAR003W SMK1P41808 388 aa6.15□□□□□ -1.42
SWD1YAR003W MPC1P53157 130 aaKnown RBP6.15□□□□□ -1.42
SWD1YAR003W YGR067CP53243 804 aa6.15□□□□□ -1.42
SWD1YAR003W COG5P53951 403 aa6.15□□□□□ -1.42
SWD1YAR003W YLR460CP54007 376 aa6.15□□□□□ -1.42
SWD1YAR003W YSA1Q01976 231 aa6.15□□□□□ -1.42
SWD1YAR003W YPL068CQ02749 293 aa6.15□□□□□ -1.42
SWD1YAR003W RNH202Q05635 350 aa6.15□□□□□ -1.42
SWD1YAR003W YPL066WQ12194 479 aa6.15□□□□□ -1.42
SWD1YAR003W YLR126CQ12288 251 aa6.15□□□□□ -1.42
SWD1YAR003W MRPS28P21771 286 aa6.14□□□□□ -1.43
SWD1YAR003W RHB1P25378 209 aa6.14□□□□□ -1.43
SWD1YAR003W ITR2P30606 609 aa6.14□□□□□ -1.43
SWD1YAR003W HBS1P32769 611 aaKnown RBP6.14□□□□□ -1.43
SWD1YAR003W ECM8P38246 354 aa6.14□□□□□ -1.43
SWD1YAR003W ECM34P38728 170 aa6.14□□□□□ -1.43
SWD1YAR003W YLF2P38746 405 aa6.14□□□□□ -1.43
SWD1YAR003W YHR097CP38809 366 aaKnown RBP6.14□□□□□ -1.43
SWD1YAR003W PEX7P39108 375 aa6.14□□□□□ -1.43
SWD1YAR003W YIL067CP40514 678 aa6.14□□□□□ -1.43
SWD1YAR003W SHR5P41912 237 aa6.14□□□□□ -1.43
SWD1YAR003W GCN20P43535 752 aaKnown RBP6.14□□□□□ -1.43
SWD1YAR003W YKR011CQ02209 353 aa6.14□□□□□ -1.43
SWD1YAR003W YMR210WQ03649 449 aa6.14□□□□□ -1.43
SWD1YAR003W SMP3Q04174 516 aa6.14□□□□□ -1.43
SWD1YAR003W ARV1Q06541 321 aa6.14□□□□□ -1.43
SWD1YAR003W NOP12Q08208 459 aaKnown RBP6.14□□□□□ -1.43
SWD1YAR003W NFI1Q12216 726 aa6.14□□□□□ -1.43
SWD1YAR003W YIL046W-AQ3E7Z4 54 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms