RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 RASGRF1Q13972 1273 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 MTERF2Q49AM1 385 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 KSR2Q6VAB6 950 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 IRF2BP1Q8IU81 584 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 FRS2Q8WU20 508 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 RPGRQ92834 1020 aaKnown RBP8.14□□□□□ -1.11
ATM-227ENST00000638786 EPB41L4BQ9H329 900 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 RNF181Q9P0P0 153 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 DDX60Q8IY21 1712 aaKnown RBP8.14□□□□□ -1.11
ATM-227ENST00000638786 COL4A1P02462 1669 aa8.14□□□□□ -1.11
ATM-227ENST00000638786 SH3TC1Q8TE82 1336 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 OR14I1A6ND48 311 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 FARP2O94887 1054 aaPredicted RBP8.13□□□□□ -1.11
ATM-227ENST00000638786 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
ATM-227ENST00000638786 IGKV5-2P06315 115 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 MSL3P1P0C860 447 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 CYP4F3Q08477 520 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 SLC10A5Q5PT55 438 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 SPATC1Q76KD6 591 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
ATM-227ENST00000638786 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 FER1L6Q2WGJ9 1857 aa8.13□□□□□ -1.11
ATM-227ENST00000638786 IBTKQ9P2D0 1353 aaPredicted RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 NPHS1O60500 1241 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 MPOP05164 745 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 TACR1P25103 407 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 GFRA1P56159 465 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 PRSS53Q2L4Q9 553 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 CRY2Q49AN0 593 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 NPLOC4Q8TAT6 608 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 SSH1Q8WYL5 1049 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 SRPK1Q96SB4 655 aaKnown RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 MMP19Q99542 508 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 IER2Q9BTL4 223 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 PDLIM7Q9NR12 457 aa8.12□□□□□ -1.11
ATM-227ENST00000638786 ZNF277Q9NRM2 450 aaPredicted RBP8.12□□□□□ -1.11
ATM-227ENST00000638786 CACNA1FO60840 1977 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 ABCC4O15439 1325 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 C7orf72A4D263 438 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 FAM221BA6H8Z2 402 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 SCG5P05408 212 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 SSRP1Q08945 709 aaKnown RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 ZNF648Q5T619 568 aaPredicted RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 BICRALQ6AI39 1079 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 IQCEQ6IPM2 695 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 SLC4A10Q6U841 1118 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 TMEM145Q8NBT3 493 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 DNAAF4Q8WXU2 420 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 UBXN4Q92575 508 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 ZNF669Q96BR6 464 aaPredicted RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 FAM84AQ96KN4 292 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 AARSD1Q9BTE6 412 aaKnown RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 CWC25Q9NXE8 425 aaPredicted RBP8.11□□□□□ -1.11
ATM-227ENST00000638786 GULP1Q9UBP9 304 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 RWDD3Q9Y3V2 267 aa8.11□□□□□ -1.11
ATM-227ENST00000638786 MEFVO15553 781 aaPredicted RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 PRODHO43272 600 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 CAPNS1P04632 268 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 PCCAP05165 728 aaPredicted RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 CORO7P57737 925 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 ERVFRD-1P60508 538 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 NEXNQ0ZGT2 675 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 RASA3Q14644 834 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 CCDC93Q567U6 631 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 MBLAC2Q68D91 279 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 UBE3BQ7Z3V4 1068 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 TRMT2AQ8IZ69 625 aaKnown RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 LZTR1Q8N653 840 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 POU5F2Q8N7G0 328 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 ZBTB38Q8NAP3 1195 aaPredicted RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 CCDC191Q8NCU4 936 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 KREMEN2Q8NCW0 462 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 USP33Q8TEY7 942 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 KCTD13Q8WZ19 329 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 DIO2Q92813 273 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 CELF1Q92879 486 aaKnown RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 CRAMP1Q96RY5 1269 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 SLC38A3Q99624 504 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 ZNF552Q9H707 407 aaPredicted RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 NMRK2Q9NPI5 230 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 ARHGEF4Q9NR80 690 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 SNTG2Q9NY99 539 aa8.1□□□□□ -1.11
ATM-227ENST00000638786 TMEFF2Q9UIK5 374 aaPredicted RBP8.1□□□□□ -1.11
ATM-227ENST00000638786 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
ATM-227ENST00000638786 ARID1BQ8NFD5 2236 aaPredicted RBP8.09□□□□□ -1.11
ATM-227ENST00000638786 TRAV20A0A0B4J274 112 aa8.09□□□□□ -1.11
ATM-227ENST00000638786 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
ATM-227ENST00000638786 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.11
ATM-227ENST00000638786 MESP2Q0VG99 397 aa8.09□□□□□ -1.11
ATM-227ENST00000638786 GCKRQ14397 625 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms