RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
ATM-227ENST00000638786 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
ATM-227ENST00000638786 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
ATM-227ENST00000638786 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
ATM-227ENST00000638786 FOXD1Q16676 465 aa23.1■■□□□ 1.29
ATM-227ENST00000638786 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
ATM-227ENST00000638786 POTEDQ86YR6 584 aa22.84■■□□□ 1.25
ATM-227ENST00000638786 ADRA2BP18089 450 aa21.96■■□□□ 1.11
ATM-227ENST00000638786 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
ATM-227ENST00000638786 MSH5O43196 834 aa21.77■■□□□ 1.08
ATM-227ENST00000638786 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
ATM-227ENST00000638786 PPP4R3CPQ6ZMV5 832 aa20.27■□□□□ 0.84
ATM-227ENST00000638786 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
ATM-227ENST00000638786 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
ATM-227ENST00000638786 KCNA4P22459 653 aa19.81■□□□□ 0.76
ATM-227ENST00000638786 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
ATM-227ENST00000638786 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
ATM-227ENST00000638786 DMRT2Q9Y5R5 561 aa19.59■□□□□ 0.73
ATM-227ENST00000638786 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
ATM-227ENST00000638786 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
ATM-227ENST00000638786 CACNB1Q02641 598 aaPredicted RBP19.23■□□□□ 0.67
ATM-227ENST00000638786 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
ATM-227ENST00000638786 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
ATM-227ENST00000638786 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
ATM-227ENST00000638786 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
ATM-227ENST00000638786 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
ATM-227ENST00000638786 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
ATM-227ENST00000638786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATM-227ENST00000638786 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
ATM-227ENST00000638786 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
ATM-227ENST00000638786 ZBTB22O15209 634 aa18.21■□□□□ 0.51
ATM-227ENST00000638786 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
ATM-227ENST00000638786 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
ATM-227ENST00000638786 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
ATM-227ENST00000638786 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
ATM-227ENST00000638786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
ATM-227ENST00000638786 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
ATM-227ENST00000638786 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
ATM-227ENST00000638786 POTEHQ6S545 545 aa17.68■□□□□ 0.42
ATM-227ENST00000638786 APLP2Q06481 763 aa17.63■□□□□ 0.41
ATM-227ENST00000638786 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
ATM-227ENST00000638786 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
ATM-227ENST00000638786 CAPN15O75808 1086 aa17.49■□□□□ 0.39
ATM-227ENST00000638786 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
ATM-227ENST00000638786 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
ATM-227ENST00000638786 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
ATM-227ENST00000638786 ABCB7O75027 752 aa17.15■□□□□ 0.34
ATM-227ENST00000638786 DSG3P32926 999 aa17.15■□□□□ 0.34
ATM-227ENST00000638786 POLA2Q14181 598 aa17.12■□□□□ 0.33
ATM-227ENST00000638786 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
ATM-227ENST00000638786 FBLN2P98095 1184 aa16.78■□□□□ 0.28
ATM-227ENST00000638786 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
ATM-227ENST00000638786 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
ATM-227ENST00000638786 FKBP8Q14318 412 aa16.43■□□□□ 0.22
ATM-227ENST00000638786 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
ATM-227ENST00000638786 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
ATM-227ENST00000638786 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
ATM-227ENST00000638786 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
ATM-227ENST00000638786 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
ATM-227ENST00000638786 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
ATM-227ENST00000638786 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
ATM-227ENST00000638786 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
ATM-227ENST00000638786 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
ATM-227ENST00000638786 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
ATM-227ENST00000638786 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATM-227ENST00000638786 PROM2Q8N271 834 aa16.03■□□□□ 0.16
ATM-227ENST00000638786 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
ATM-227ENST00000638786 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
ATM-227ENST00000638786 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
ATM-227ENST00000638786 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
ATM-227ENST00000638786 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
ATM-227ENST00000638786 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
ATM-227ENST00000638786 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
ATM-227ENST00000638786 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
ATM-227ENST00000638786 HAX1O00165 279 aa15.65■□□□□ 0.1
ATM-227ENST00000638786 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
ATM-227ENST00000638786 EVX2Q03828 476 aa15.6■□□□□ 0.09
ATM-227ENST00000638786 MIER1Q8N108 512 aa15.58■□□□□ 0.08
ATM-227ENST00000638786 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
ATM-227ENST00000638786 PLCD3Q8N3E9 789 aa15.55■□□□□ 0.08
ATM-227ENST00000638786 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
ATM-227ENST00000638786 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
ATM-227ENST00000638786 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
ATM-227ENST00000638786 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
ATM-227ENST00000638786 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
ATM-227ENST00000638786 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
ATM-227ENST00000638786 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
ATM-227ENST00000638786 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
ATM-227ENST00000638786 MNX1P50219 401 aaPredicted RBP15.28■□□□□ 0.04
ATM-227ENST00000638786 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
ATM-227ENST00000638786 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
ATM-227ENST00000638786 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
ATM-227ENST00000638786 LHX8Q68G74 356 aa15.14■□□□□ 0.01
ATM-227ENST00000638786 NUBP1P53384 320 aa15.11■□□□□ 0.01
ATM-227ENST00000638786 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
ATM-227ENST00000638786 GABBR2O75899 941 aa15.07■□□□□ 0
ATM-227ENST00000638786 RASEFQ8IZ41 740 aa15.06■□□□□ 0
ATM-227ENST00000638786 DCAF8Q5TAQ9 597 aa15.04■□□□□ -0
ATM-227ENST00000638786 CIZ1Q9ULV3 898 aaPredicted RBP15.03■□□□□ -0
ATM-227ENST00000638786 FAM212AQ96EL1 285 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms