RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TSPY2A6NKD2 308 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 A6NNZ2 444 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 MAP2K7O14733 419 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 ARHGAP6O43182 974 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 BBOX1O75936 387 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 SASH3O75995 380 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 LUC7L3O95232 432 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 PARP1P09874 1014 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TROVE2P10155 538 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CYP2D6P10635 497 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TOP1P11387 765 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 BMP2P12643 396 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 IL1R1P14778 569 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 LONP1P36776 959 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 PBX1P40424 430 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 FNTAP49354 379 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF132P52740 706 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 ARPC4P59998 168 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TFAP4Q01664 338 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 NFIXQ14938 502 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF174Q15697 407 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CNGA3Q16281 694 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 GNPTABQ3T906 1256 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TUBB8Q3ZCM7 444 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CFAP100Q494V2 611 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TRIM65Q6PJ69 517 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 HOOK3Q86VS8 718 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 AMIGO3Q86WK7 504 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CEP57Q86XR8 500 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CRIPAKQ8N1N5 446 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 GBP3Q9H0R5 595 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 TRMT1Q9NXH9 659 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 MCM9Q9NXL9 1143 aa7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 DDX25Q9UHL0 483 aaKnown RBP7.31□□□□□ -1.24
CDKAL1-204ENST00000613575 PHLPP1O60346 1717 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 XDHP47989 1333 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 KAT6BQ8WYB5 2073 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC151A5D8V7 595 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 CFAP69A5D8W1 941 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 H3BQF6 201 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 NMT2O60551 498 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 SEC31AO94979 1220 aaKnown RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 GNAT1P11488 350 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 VEGFAP15692 232 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 ALOX15P16050 662 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 ATP2B4P23634 1241 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 RFC4P35249 363 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 PTGIRP43119 386 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 NLRP5P59047 1200 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 TUBB4BP68371 445 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 IL17AQ16552 155 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 USH1GQ495M9 461 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 THOC7Q6I9Y2 204 aaKnown RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 MRPL14Q6P1L8 145 aaKnown RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 SMIM5Q71RC9 77 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 SYCP3Q8IZU3 236 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 BLIDQ8IZY5 108 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 TC2NQ8N9U0 490 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 ZBTB8BQ8NAP8 495 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 AFAP1L1Q8TED9 768 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 PPP2R3CQ969Q6 453 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 CTAGE1Q96RT6 745 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 IWS1Q96ST2 819 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 OSBPL10Q9BXB5 764 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 YIPF3Q9GZM5 350 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 TAOK3Q9H2K8 898 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 RPAP3Q9H6T3 665 aaPredicted RBP7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 KAT14Q9H8E8 782 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF287Q9HBT7 754 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 PCDH18Q9HCL0 1135 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 CD209Q9NNX6 404 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 MAD2L2Q9UI95 211 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 PCDHA4Q9UN74 947 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 SPATA31A6Q5VVP1 1343 aa7.3□□□□□ -1.24
CDKAL1-204ENST00000613575 hCG_1642624A0A1W2PR95 340 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 B4DLN1 442 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 MEN1O00255 615 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 LAD1O00515 517 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 TADA3O75528 432 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 TMCC1O94876 653 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 GNRH1P01148 92 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 HMGB2P26583 209 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 CSE1LP55060 971 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 ATP2B2Q01814 1243 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 INAQ16352 499 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 SLC35G1Q2M3R5 365 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 NANOGNBQ7Z5D8 188 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 YTHDF3Q7Z739 585 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 LMNTD2Q8IXW0 634 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF444Q8N0Y2 327 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms