RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CCDC159P0C7I6 412 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CDO1Q16878 200 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 C7orf31Q8N865 590 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 FAM96AQ9H5X1 160 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF608Q9ULD9 1512 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 KIF1CO43896 1103 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 SNX2O60749 519 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CNGA3Q16281 694 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 TRIM60Q495X7 471 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 USP6NLQ92738 828 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 NUP85Q9BW27 656 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 NEUROG2Q9H2A3 272 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 EMILIN3Q9NT22 766 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ABHD10Q9NUJ1 306 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 RNF103-CHMP3A0A140T963 221 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 GMNCA6NCL1 334 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 PI4K2BG5E9Z4 385 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 SERPINI2O75830 405 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CHRNDQ07001 517 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 EP400NLQ6ZTU2 488 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 SFMBT1Q9UHJ3 866 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ANAPC7Q9UJX3 599 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 TRAF3IP3Q9Y228 551 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 LGALS16A8MUM7 142 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 COPS2P61201 443 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ALKBH5Q6P6C2 394 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 TMCO5AQ8N6Q1 288 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF804BA4D1E1 1349 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 IFNA8P32881 189 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 UBXN2AP68543 259 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 TBCCQ15814 346 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 LCMT1Q9UIC8 334 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 SRPRBQ9Y5M8 271 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 KDM1AO60341 852 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 SERPINB2P05120 415 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CCNE1P24864 410 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 RBM41Q96IZ5 413 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CALR3Q96L12 384 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 GSPT2Q8IYD1 628 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 ALKBH8Q96BT7 664 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 NAF1Q96HR8 494 aaKnown RBP10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
CSMD1-217ENST00000602723 CALB1P05937 261 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ARHGEF37A1IGU5 675 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 RANBP1P43487 201 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KLHL38Q2WGJ6 581 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 NR1H4Q96RI1 486 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ACTN3Q08043 901 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 NLRP14Q86W24 1093 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 MSTO1Q9BUK6 570 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 RAD23BP54727 409 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 EPHB1P54762 984 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 MRPL28Q13084 256 aaKnown RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 PPP6R3Q5H9R7 873 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KRT27Q7Z3Y8 459 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ZBTB33Q86T24 672 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 SCG3Q8WXD2 468 aaKnown RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 CYP26B1Q9NR63 512 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 MYH3P11055 1940 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 DNAJC6O75061 913 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KCNA6P17658 529 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 MAP3K10Q02779 954 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KCTD2Q14681 263 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ARHGEF25Q86VW2 580 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 SPATA17Q96L03 361 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 SUGT1Q9Y2Z0 365 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 HAUS5O94927 633 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 APOA1P02647 267 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 PCCAP05165 728 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 PAPOLAP51003 745 aaKnown RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 GPS1Q13098 491 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 SURF1Q15526 300 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 RASSF3Q86WH2 238 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KIAA2013Q8IYS2 634 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 MIF4GDA9UHW6 222 aaKnown RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 CCDC90BQ9GZT6 254 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ADAMTS1Q9UHI8 967 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF711Q9Y462 761 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 KPNA7A9QM74 516 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 HNRNPCP07910 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 TRPC1P48995 793 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 DRP2Q13474 957 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 OR6B2Q6IFH4 312 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 CATSPER3Q86XQ3 398 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 OSBPL9Q96SU4 736 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ZNF212Q9UDV6 495 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 NFKBIAP25963 317 aa10.25□□□□□ -0.77
CSMD1-217ENST00000602723 ARL6IP4Q66PJ3 421 aaKnown RBP10.25□□□□□ -0.77
CSMD1-217ENST00000602723 BPIFA3Q9BQP9 254 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms