RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RPGRIP1Q96KN7 1286 aa9.27□□□□□ -0.92
RPAIN-215ENST00000575112 FAM118BQ9BPY3 351 aa9.27□□□□□ -0.92
RPAIN-215ENST00000575112 FRMD4BQ9Y2L6 1034 aa9.27□□□□□ -0.92
RPAIN-215ENST00000575112 DCCP43146 1447 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 DUOX1Q9NRD9 1551 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 PEX10O60683 326 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 FSBPO95073 299 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 SLCO1A2P46721 670 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 DHX9Q08211 1270 aaKnown RBP9.27□□□□□ -0.93
RPAIN-215ENST00000575112 MESDQ14696 234 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 ASTE1Q2TB18 679 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-215ENST00000575112 FAM182AQ5T1J6 154 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 GALNT17Q6IS24 598 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 DEFB132Q7Z7B7 95 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 SAAL1Q96ER3 474 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 GDF3Q9NR23 364 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 DISP2A7MBM2 1401 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 DOCK2Q92608 1830 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 MYH7BA7E2Y1 1941 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
RPAIN-215ENST00000575112 RASSF9O75901 435 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 CCDC172P0C7W6 258 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 SNX1Q13596 522 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 EMBQ6PCB8 327 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 KDM7AQ6ZMT4 941 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 ATP6V1G3Q96LB4 118 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 RUSC1Q9BVN2 902 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 LRRC27Q9C0I9 530 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 ARHGEF10LQ9HCE6 1279 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 GPRC5CQ9NQ84 441 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.93
RPAIN-215ENST00000575112 NUP98P52948 1817 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 FAM86B1E9PN63 330 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 GCOM1H8Y6P7 765 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 M0R2N6 131 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 KRIT1O00522 736 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 FAM86B2P0C5J1 330 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 POLR2MP0CAP2 368 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 PPP4CP60510 307 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 BIRC3Q13489 604 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 XKR9Q5GH70 373 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 ALKBH5Q6P6C2 394 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 MIER3Q7Z3K6 550 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 FAM186BQ8IYM0 893 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 MGARPQ8TDB4 240 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 CAVIN3Q969G5 261 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 ERGIC2Q96RQ1 377 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 SELENOSQ9BQE4 189 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 NT5C3AQ9H0P0 336 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 DHX36Q9H2U1 1008 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 TMOD4Q9NZQ9 345 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 TPX2Q9ULW0 747 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 NOVA2Q9UNW9 492 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 L3MBTL1Q9Y468 752 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 CHRM1P11229 460 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 NPR1P16066 1061 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 STAT2P52630 851 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 RCAN1P53805 252 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 NPEPPSP55786 919 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 CFAP221Q4G0U5 840 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 RC3H1Q5TC82 1133 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 HAS1Q92839 578 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 CCDC114Q96M63 670 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 PAIP2Q9BPZ3 127 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 EIF2AK1Q9BQI3 630 aaKnown RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 TOGARAM1Q9Y4F4 1720 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 GRID2IPA4D2P6 1211 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 EML1O00423 815 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 DAPK3O43293 454 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 ZNF844Q08AG5 666 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 C6orf89Q6UWU4 347 aa9.26□□□□□ -0.93
RPAIN-215ENST00000575112 ZNF142P52746 1687 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-215ENST00000575112 GSTTP1A0A1W2PQM5 241 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 H0YGN5 161 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 PEX3P56589 373 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 TNIP1Q15025 636 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 HP1BP3Q5SSJ5 553 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-215ENST00000575112 ALS2CLQ60I27 953 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 FUKQ8N0W3 1084 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 INPP4AQ96PE3 977 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-215ENST00000575112 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-215ENST00000575112 RIC8AQ9NPQ8 531 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 PLCB1Q9NQ66 1216 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 FBXL5Q9UKA1 691 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 PRR12Q9ULL5 1215 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 NFS1Q9Y697 457 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 CACNA1SQ13698 1873 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 POLRMTO00411 1230 aaKnown RBP9.25□□□□□ -0.93
RPAIN-215ENST00000575112 LAD1O00515 517 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 SPOPO43791 374 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 SHBGP04278 402 aa9.25□□□□□ -0.93
RPAIN-215ENST00000575112 MYBL1P10243 752 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms