RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 FLOT1O75955 427 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 LUC7L3O95232 432 aaKnown RBP15.61■□□□□ 0.09
SMG6-215ENST00000574501 PDHA1P08559 390 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 H2AFZP0C0S5 128 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 UCHL3P15374 230 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
SMG6-215ENST00000574501 TUBP50607 506 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 GRM4Q14833 912 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 CALCRLQ16602 461 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 KIAA1755Q5JYT7 1200 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 SPDYCQ5MJ68 293 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 SLC30A9Q6PML9 568 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 H2AFVQ71UI9 128 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
SMG6-215ENST00000574501 U2AF1L4Q8WU68 220 aaKnown RBP15.61■□□□□ 0.09
SMG6-215ENST00000574501 RMDN2Q96LZ7 410 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
SMG6-215ENST00000574501 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
SMG6-215ENST00000574501 SLC37A4O43826 429 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 SMIM24O75264 130 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 FESP07332 822 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 USP17L8P0C7I0 530 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 NEFHP12036 1026 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 KRT13P13646 458 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 RNASELQ05823 741 aaKnown RBP15.6■□□□□ 0.09
SMG6-215ENST00000574501 PSMD2Q13200 908 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 ADAM9Q13443 819 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 SEPT2Q15019 361 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 FAM26FQ5R3K3 315 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 AADACL2Q6P093 401 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 ASRGL1Q7L266 308 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 EXOC3L1Q86VI1 746 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 JAMLQ86YT9 394 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 ANKRD42Q8N9B4 389 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 GDAP1Q8TB36 358 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 GJA10Q969M2 543 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 DYNLL2Q96FJ2 89 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 IFT74Q96LB3 600 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 UIMC1Q96RL1 719 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 VAT1LQ9HCJ6 419 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 SPDYE5A6NIY4 337 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 RASGRF2O14827 1237 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 GNAT1P11488 350 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
SMG6-215ENST00000574501 AUHQ13825 339 aaKnown RBP15.6■□□□□ 0.09
SMG6-215ENST00000574501 PLS1Q14651 629 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 SUSD4Q5VX71 490 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 BARGINQ6ZT62 677 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 SYCE1Q8N0S2 351 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 C18orf8Q96DM3 657 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 TSC22D3Q99576 134 aa15.6■□□□□ 0.09
SMG6-215ENST00000574501 AJAP1Q9UKB5 411 aaPredicted RBP15.6■□□□□ 0.09
SMG6-215ENST00000574501 NPHP3-ACAD11A0A0J9YXS1 232 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 KIAA0391O15091 583 aaKnown RBP15.59■□□□□ 0.09
SMG6-215ENST00000574501 PAPOLAP51003 745 aaKnown RBP15.59■□□□□ 0.09
SMG6-215ENST00000574501 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
SMG6-215ENST00000574501 ANO7Q6IWH7 933 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 GJB7Q6PEY0 223 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 GBP7Q8N8V2 638 aaPredicted RBP15.59■□□□□ 0.09
SMG6-215ENST00000574501 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 CEP63Q96MT8 703 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 PIDD1Q9HB75 910 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 PAPOLBQ9NRJ5 636 aaKnown RBP15.59■□□□□ 0.09
SMG6-215ENST00000574501 MCM9Q9NXL9 1143 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 STX8Q9UNK0 236 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMG6-215ENST00000574501 AHCYL1O43865 530 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 HIP1RO75146 1068 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 TDP2O95551 362 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 CCNG1P51959 295 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 GALCP54803 685 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 LONRF1Q17RB8 773 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 SPATA21Q7Z572 469 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 PIGBQ92521 554 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 MTMR9Q96QG7 549 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 ETNK1Q9HBU6 452 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 HDAC9Q9UKV0 1011 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
SMG6-215ENST00000574501 DDX3YO15523 660 aaKnown RBP15.58■□□□□ 0.09
SMG6-215ENST00000574501 ABCB4P21439 1286 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 PCK1P35558 622 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 RPL21P46778 160 aaKnown RBP15.58■□□□□ 0.09
SMG6-215ENST00000574501 GNAQP50148 359 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 MXRA7P84157 204 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 DPY19L2P1Q6NXN4 242 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 TAOK1Q7L7X3 1001 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 CCDC25Q86WR0 208 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 UTP4Q969X6 686 aaKnown RBP15.58■□□□□ 0.09
SMG6-215ENST00000574501 RXFP1Q9HBX9 757 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 GRHL1Q9NZI5 618 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 TMOD4Q9NZQ9 345 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 ARL2BPQ9Y2Y0 163 aa15.58■□□□□ 0.09
SMG6-215ENST00000574501 BZW2Q9Y6E2 419 aaKnown RBP15.58■□□□□ 0.09
SMG6-215ENST00000574501 LRP5O75197 1615 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 TMEM120BA0PK00 339 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 KLRF2D3W0D1 207 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 GNA14O95837 355 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 GH1P01241 217 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 PLCG2P16885 1265 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms