RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 TUBGCP2Q9BSJ2 902 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 FAM205AQ6ZU69 1335 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 A6NNZ2 444 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 MAFGO15525 162 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 IFNB1P01574 187 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 MNAT1P51948 309 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 HERVK_113P62684 666 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 RPS6KA1Q15418 735 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 YAF2Q8IY57 180 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 BNIP3LO60238 219 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 LRRN2O75325 713 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 KRT10P13645 584 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 GEN1Q17RS7 908 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 XRRA1Q6P2D8 792 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 FAM76AQ8TAV0 307 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 EBAG9O00559 213 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 PGK2P07205 417 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 VAV2P52735 878 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 PPATQ06203 517 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 POLD4Q9HCU8 107 aa13.18□□□□□ -0.3
NR4A1-215ENST00000550557 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
NR4A1-215ENST00000550557 GIPC1O14908 333 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 SUPT20HL2P0C7V6 817 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 VCAM1P19320 739 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 TM4SF1P30408 202 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 SEPT10Q9P0V9 454 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 TMEM88BA6NKF7 163 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 MYO1FO00160 1098 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 BFSP2Q13515 415 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 TLDC2A0PJX2 215 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 TADA2AO75478 443 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 RAG1P15918 1043 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 GPC3P51654 580 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 CCT6BQ92526 530 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
NR4A1-215ENST00000550557 RTFDC1Q9BY42 306 aaPredicted RBP13.17□□□□□ -0.3
NR4A1-215ENST00000550557 ICAM1P05362 532 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 DHX40Q8IX18 779 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 DGAT1O75907 488 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 CLCN6P51797 869 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 ANKS4BQ8N8V4 417 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 USP27XA6NNY8 438 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 HBP1O60381 514 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 COBLO75128 1261 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 EHD4Q9H223 541 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 UBE2TQ9NPD8 197 aaPredicted RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 CRCPO75575 148 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms